Xiphophorus couchianus (Monterrey platyfish): 114155694
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Entry
114155694 CDS
T05908
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114155694 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114155694 (vps45)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114155694 (vps45)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
114155694
NCBI-ProteinID:
XP_027891506
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Position
13:20076912..20090564
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AA seq
650 aa
AA seq
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MRYVVRNDVRDPEEDCIGARSSRAQLIDLHNNNKTGIQSCHNGRCWHFTAGLDFVCLFLS
QLCLSVAIMNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLF
ERIDSQSRDSMKHLKAICFLRPTKENVQHLIQELRRPKYSVYFIYFSNVISKSEIKALAE
ADEQEVVAEVQEFYGDFIAVNPHLFSLNLQGVSRRCTDQVLSGRNRFPGRTWEPSMLSRC
TQGLTSVLLALKKCPMIRYQLSSDMAKRLAESVKQIITKEYELFDFRKTEVPPLLLILDR
SDDAITPLLNQWTYQAMVHELLGLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYL
NFGEIGTNIKNLMEDFQKKKPKDQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGEL
SRLVSERQLMEVSEVEQELACQNDHSNAQQSVRRLLQNPRVSELDAVRLVMLYALRYERH
SSSILPSLMEELSRKGVSERYRRMVQSVVEYGGKRIRGSDLITPTDAVAITKQFFKGLKG
VENVYTQHQPLLHDTLDKLIKGRLKDSQFPYLGASSLRDRPQDIMVFLIGGATYEEALTV
YNLNRNTPGVRIVLGGSAIHNTKSFLEEVILATGHSGDRAQGSGRHSTRR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagatacgtagtacgtaatgacgtcagagacccggaagaagattgcatcggtgctcgg
agctcaagagctcagctgatagatcttcacaacaacaacaaaacaggcatacagagctgc
cataacgggcgctgctggcattttaccgccggtttagactttgtttgtttgtttttgtcg
cagttgtgtctcagcgtcgccatcatgaacgtgacgctcgcggtgaagcagtacatctcc
aaaatgattgaaaacagcgggcccgggatgaaggttctgctcatggataaggagacgacc
agcatagtgagtgtggtttacacccagtctgaaatcctgcagaaggaggtttacctgttc
gaacggatcgactctcagagcagagacagcatgaagcacctgaaggccatctgcttcctt
cgtccaaccaaggagaacgtgcagcatctaatccaggagctaagaagaccaaagtacagc
gtttacttcatctacttcagtaatgtgatcagtaagagtgagatcaaagctctggctgag
gcagatgaacaggaagtggtggctgaagtccaggagttttatggagatttcatcgctgtg
aatcctcacctgttttctctcaacctgcagggagtttcccggagatgcaccgatcaggtt
ttatctggccgaaaccgtttcccgggtcggacctgggaaccctccatgttgtcgcgctgc
acgcagggtttgacctccgtcctgctcgctctgaagaaatgtccaatgatccgctaccag
ctgtcctctgacatggccaaacgcctcgcagaaagcgtcaagcaaatcatcacgaaggaa
tacgagctgtttgacttcaggaagactgaagttcctcctctgctgctgatcctcgaccgc
agcgacgacgccatcacaccgctgctcaaccagtggacgtaccaggcgatggtccatgag
ctgctgggtctgaacaacaaccggatcgacctgtccagagtcccggggatcagcaaagac
ctgagggaagtggtgctgtctgccgagaacgacgagttttatgccaacaacttgtacctg
aatttcggggagatcggcaccaacataaagaacctgatggaagatttccagaaaaagaaa
cccaaagaccaacagaagctggagtccatttctgacatgaaggcgtttgtggacaactac
cctcagtttaagaagatgtcgggaaccgtgtcgaagcacgtcacggtggtgggggagctg
tcccggctggtgtctgagcggcagctgatggaggtgtcggaggtggagcaggagctggcc
tgtcagaatgaccattctaacgctcagcagagcgttcggcggctgctgcagaatcctcgg
gtctcggagctggacgccgtccgtctcgtcatgctctacgctttgaggtatgagcgccac
agcagcagcatcctcccgtcgctgatggaggagctgagcaggaagggagtttctgaacgc
taccgcaggatggttcagtcggttgtggagtacggtgggaagagaatcagagggagtgac
ctcatcacaccgacggatgctgtcgccatcaccaaacaattcttcaaaggactaaagggc
gtagagaatgtgtatacacagcatcagcctctgctgcacgacactctggataagctgatt
aaaggtcgactcaaagacagtcagttcccgtacctgggagccagcagcctgagagacagg
cctcaggacattatggtgttcctgatcggtggagcaacgtatgaagaagctttgactgtt
tacaacctgaatcgtaacactccgggggttcggattgtgctgggaggaagcgccatccac
aacactaagagtttccttgaagaggtgatcctggcgacgggtcacagcggcgacagagca
cagggaagtggacgccactccaccaggcgatga
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