Xiphophorus couchianus (Monterrey platyfish): 114155813
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Entry
114155813 CDS
T05908
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114155813
03021 Transcription machinery [BR:
xco03021
]
114155813
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114155813
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
114155813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-LYAR
zf-C2H2_15
Zap1_zf1
Zf-C2H2_ZNF451_2nd
zf-C2H2_16
zf-C2H2_6
DUF7479
zf-met
zf-C2H2_2
DUF2180
zf-C2H2_8
Zn_ribbon_8
BAH
zf_C2H2_ZNF598
Zf-C2H2_ZNF451
DUF4764
Motif
Other DBs
NCBI-GeneID:
114155813
NCBI-ProteinID:
XP_027891725
LinkDB
All DBs
Position
13:complement(18553771..18555275)
Genome browser
AA seq
336 aa
AA seq
DB search
MQCNIYYQERRSTLDQEELEPLQVKQEQEEPEDHQIKEEQEDLKHQQIKVEEKEVYCSQG
EEQIELKQETDTCMVVPVDEQTDHTESEPNRNQDIFQEAAEAENQNQERRKPFSSVICEK
RLTFKSVFDAHMRTHTGEKPFTCVNCGKSFFHKHHLTRHMMIHTGEKQFTCVTCGKSFIR
KHVLTKHMMIHTGEKPFSCVTCGKRFLRKQDFSKHMMIHTGEKPFPCVTCGKSFIRKQDL
SKHKKIYTGEKSFSCVNCGKRFSQKQNLTQHMMRHTGEKPFSCVTCGKSFIRKQDLTQHM
MIHTGEKPFSCVTCGKSFIRKQDLTKHMTRHTVEKL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtaacatttattaccaggagaggagatccactctggaccaggaggagttggaa
cctctgcaggtgaaacaagaacaggaagagccagaagatcatcagataaaagaagagcag
gaggatctaaaacaccagcagataaaagtggaagagaaagaagtttactgcagtcagggt
gaagaacagattgaattaaaacaggagactgatacctgcatggtggttcctgttgatgag
caaacagaccacactgaatcagaaccaaacaggaaccaagacatcttccaggaagctgct
gaagctgagaaccaaaatcaggaaagaagaaaacctttctcaagtgtcatctgtgaaaag
cgtttgactttcaaatctgtttttgatgctcatatgagaactcatacgggtgaaaagccg
tttacatgtgtgaactgtggaaaaagtttttttcacaaacatcatttaactcggcacatg
atgattcacactggtgaaaagcagtttacatgtgtgacctgtgggaaaagttttattcga
aaacatgttttaactaagcacatgatgattcacactggtgaaaagccgttttcttgtgtg
acctgtggaaaacgttttcttcgaaaacaggatttcagtaagcacatgatgattcatact
ggtgaaaagccatttccatgtgtgacctgtggaaaaagttttattcgaaaacaggattta
agtaagcacaagaagatttacactggtgaaaagtctttttcatgtgtgaactgtggaaaa
cgttttagtcaaaaacagaatttaactcagcacatgatgagacacactggtgaaaagccg
ttttcatgtgtgacctgtggaaaaagttttattcgaaaacaggatttaactcagcacatg
atgattcacactggtgaaaagccgttttcatgtgtgacctgtggaaaaagttttattcga
aaacaggatttaactaagcacatgacacgtcacacagttgaaaagctgtag
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