Xiphophorus couchianus (Monterrey platyfish): 114155815
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Entry
114155815 CDS
T05908
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114155815
03021 Transcription machinery [BR:
xco03021
]
114155815
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114155815
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
114155815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
zf-C2H2_jaz
Zap1_zf1
C2CH-3rd_BIRD-IDD
zf-LYAR
zf-C2H2_16
Zn_ribbon_3
zf-C2H2_8
zf-C2H2_2
zf_C2H2_ZHX
zf-UBP
DUF7479
Zf-C2H2_ZNF451_2nd
HVO_2753_ZBP
DUF2180
DUF7381
zf-C2H2_11
zf-C2H2_6
zf-AN1
Zn_ribbon_8
IBR
Motif
Other DBs
NCBI-GeneID:
114155815
NCBI-ProteinID:
XP_027891728
LinkDB
All DBs
Position
13:complement(18576890..18577977)
Genome browser
AA seq
233 aa
AA seq
DB search
MRTHTGEKPFSCVNCGKCFFRKHDLTRHVMIHTGEKLFSCVNCGKSFIRKQDLTEHMMIH
TGEKPFSCVNCGISFGDKRTLTQHMMIHTRENPFSCVNCGKSFSHKHNLTQHMMIHTGEK
PFSCVNCGKSFIRKQDLTEHMMIHTGEKPFSCVNCGKSFIRKQDLTQHMRIHTGEKPFSC
GNCGKSFCRKQTLIRHMMTHTGEKPFSCGNCGKSFRKKHSLTQHMTRHTVEKL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagaactcatacgggtgaaaagccgttttcatgtgtgaactgtgggaaatgttttttt
cgaaaacatgatttaactcgtcatgtgatgattcacactggtgaaaagctgttttcatgt
gtgaactgtggaaaaagttttattcgaaaacaggatttaactgagcacatgatgattcac
actggtgaaaagccattttcatgtgtgaactgtggaataagttttggtgacaaacgaacg
ttaactcagcacatgatgattcacactcgtgaaaatccgttttcatgtgtgaactgtgga
aaaagttttagtcataaacacaatttaactcagcatatgatgattcacactggtgaaaag
ccgttttcatgtgtgaactgtggaaaaagttttattcgaaaacaggatttaactgagcac
atgatgattcacactggtgaaaagccgttttcatgtgtgaactgtggaaaaagttttatt
cgaaaacaggatttaactcagcacatgaggattcacactggtgaaaagccgttttcatgt
ggaaattgtggaaagagtttttgtcgaaaacaaactttaattcggcacatgatgactcac
actggtgaaaagccgttttcatgtggaaattgtggaaaaagttttcgtaaaaaacatagt
ttaactcaacacatgacgcgtcacacagttgaaaagctgtag
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integrated database retrieval system
