KEGG   Xiphophorus couchianus (Monterrey platyfish): 114155878
Entry
114155878         CDS       T05908                                 
Symbol
elp2
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xco03016]
    114155878 (elp2)
Transfer RNA biogenesis [BR:xco03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    114155878 (elp2)
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_TEP1_C Rax2 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 114155878
NCBI-ProteinID: XP_027891807
LinkDB
Position
13:10375362..10407914
AA seq 839 aa
MAASIIETCHVACSANRTPNVVSWGRGGTVAFGTCNSVALYEPKERRVVALLNGHKGRVN
AVKWVHKKDNASERHVVSGGSDNRIILWEAQPGKFVQSVECKGHTGPVNAVDAVYLEDSK
ILIASSSSDSTVRLWLCSDDKEVECLHNVSFGSSFMMDVSLALLPGTGVPILACGGDDSR
VHLYVQESGQLQKAMSLQGHEDWVRGVKWACTGDELLLASCSQDSLIRVWRLCAKSGTDT
HTEDDHTVIKMKEDVFEVKDRGMVSRFAVSLETVLAGHENWVYGVSWQPPVYKGGELQQP
LILLSASMDKTMIIWAPEEGSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGA
LHLWCKDQDKERGWRPGVVISGHFNAVQDLSWDPEGEFILSVGSDQTTRLFTPWRKQDSK
QATWHEISRPQIHGYDMQCLAMVGGFQFVSGADEKVLRVFQAPRNFVENFASISGISKEK
LLQSSGSASLPEGASTPALGLSNKAVFQGDLVPKTTEEEEQFSSISDQYQESYFHPLSLT
EPPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSTKTLVASACKASKAEHAAVLLWSTAT
WRQLQTLPYHTLTVTQMAFSPDAKFLLAVSRDRTWSLWRRKLPTPENPEPSFSLCAHTTK
DTAMHSRIIWSCDWSPDSKYFVTSSRDKKVIVWGPCMLENSEEPVFPLEIKPCSSILDVG
DSATAVAFCPSLCSDRSYLLAVGLECGQILLYRWRPGQVGVSGSDWISGGGTDTLQSHTL
AVKRLRWRPRAGRVGLENSEMDGPSDTERKLEEKSSWVQLASASADHSVKIFNINKQAL
NT seq 2520 nt   +upstreamnt  +downstreamnt
atggcggcttccataattgagacatgccatgtagcatgcagcgcaaataggactccaaat
gttgtttcttggggtcggggagggactgtggctttcgggacgtgcaattcagtggccttg
tacgaaccaaaggaaagaagagttgtcgctttgctgaatggacacaaagggagagtaaat
gcagtcaagtgggttcacaagaaagacaatgcatcagagcgtcatgtcgtctcaggaggt
tcagacaatcggatcatcctctgggaagctcaacctgggaagttcgtccagtcagtggag
tgtaagggccacactggtcctgtcaatgctgtggatgccgtctacctggaggactctaag
atcctcattgcctcttcttcgtccgattccacagtgagattatggctctgcagtgacgac
aaagaagttgagtgcctccataatgtatcatttggaagcagtttcatgatggatgtctct
ctagctctgttgcccggcactggagttcccattctggcctgcgggggtgatgactctcgg
gtgcatctgtatgtgcaggagagcggtcagctgcagaaagccatgtcactgcaagggcat
gaagactgggttcgtggagtgaaatgggcatgtactggggacgagctgttattagccagc
tgttcacaggactctctcatcagagtgtggaggctctgtgccaaatctggcacagacacc
cacacagaagatgatcacaccgtcatcaaaatgaaagaggacgtttttgaagtgaaggac
agaggaatggtctcaaggtttgcagtgtcccttgaaactgtcttggcaggacatgagaac
tgggtttatggagtcagctggcagccccctgtctataaaggtggtgagctgcaacagcct
cttattctactctcagcctccatggacaaaaccatgatcatctgggctcctgaggaagga
tctggtgtctgggtggagcaggtgcgtgtcggggaagtaggtggaaacactctgggcttc
tatggctgccagatgagtccggatggctcgatgattctggctcatgctttccacggagca
ctacacctttggtgcaaggatcaggataaagagagagggtggagaccaggagttgtgata
tcaggtcactttaatgctgttcaagacctgagctgggatcctgagggggagttcatcctc
agcgtgggctcagaccagaccaccagactgttcactccatggaggaagcaggacagcaaa
caggcaacctggcatgaaatctctcggcctcagatccacggttatgacatgcagtgtctg
gccatggttggggggtttcagttcgtatctggagctgatgagaaggtcctcagagtgttt
caagcgcctcgaaattttgtggagaactttgctagcatctctgggatttcaaaagaaaag
ctgcttcaatccagtggctcagccagccttccagaaggagctagcacacctgccttgggt
ctttccaacaaggctgtatttcaaggcgaccttgtcccgaagactactgaagaagaggaa
cagttcagcagtatatctgaccaataccaggagtcatatttccacccgctcagcctgact
gagccacccccagaggatcatctcctccagaatacactgtggcctgaggtccagaaattg
tatggtcatggatttgagatgttctgcctcgcctctgacagcaccaagacgttggttgca
tcagcatgcaaggcatctaaagctgaacatgcagctgtgctgctgtggagcacagccacg
tggcgtcagctgcagacgttgccatatcacacccttacagtcacccagatggccttttca
cctgacgcaaagttcctgttggctgtttccagagatcgcacctggtcgttatggagacgg
aagctgccaacaccagaaaatccagagccttcgttctcattgtgcgcacacacaaccaag
gacacagccatgcacagcaggatcatctggtcgtgcgactggagccccgacagcaaatac
tttgtgacatccagtcgggacaagaaggtgatcgtgtgggggccatgcatgctggagaac
tctgaagagccagtgtttcctctggagatcaagccatgttcctccatcttagatgttggg
gattctgctacggctgtagccttttgtccgtccctctgttctgatcgcagctacttactt
gcagttggtctggagtgtggacaaatcctgctctacaggtggagacccggtcaagtgggg
gtttcagggagtgactggattagcggtggtgggacagacaccttacaaagccacacactg
gcagtgaagcggctacgctggaggccgcgggccggtcgggtaggtctggagaacagcgag
atggatgggccgagtgacacggagagaaaactcgaagagaagagctcctgggtccagctt
gctagtgccagcgcagaccactctgtcaaaatcttcaacatcaacaaacaggctctttag

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