Xiphophorus couchianus (Monterrey platyfish): 114155991
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Entry
114155991 CDS
T05908
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114155991 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114155991 (pex1)
Membrane trafficking [BR:
xco04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
114155991 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
DUF815
nSTAND3
AAA_28
NPHP3_N
RNA_helicase
AAA_33
Viral_helicase1
AAA_5
ABC_tran
AAA_18
NACHT
TIP49
AAA_24
AAA_29
ATP-synt_ab
Sigma54_activat
Sigma54_activ_2
AAA_7
TsaE
RuvB_N
AAA_23
APS_kinase
IstB_IS21
AAA_3
Motif
Other DBs
NCBI-GeneID:
114155991
NCBI-ProteinID:
XP_027891945
LinkDB
All DBs
Position
13:complement(10837076..10847005)
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AA seq
1239 aa
AA seq
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MRMFSSQGIQPIRVVFNNAKNCFLHLPSKMISHLSLQENQTLELSWDNASPVYLSWTQNR
ASSDPHSNDVELCRQMGEKLGLKDGEQGFLKPCHQVSSLNQVFVEPLSSDDWEILELHSS
ALEQKLLDQIRVVFQHGVFPVWVYSHTVIYIRITSVSPLVPYGRLEQFTELVVSQKIRTG
RSKVSDSVRRSNLDEQFHFQRGSTLPSTSEPSPDITSHSGRSQEWGGIADLKSLLHHIIR
GPYDHAPVPSVPVVFPDSIYRVCGVPPDCLCTISYIAAGVIHIFSWSSSLSTATRGGQSV
VTYGCLFKVSSPKKAKDKAKQALEKRKDGGGSKDSSRKGGKDAEEAQEEEATIVRVMCHD
GEMLERGHNKIHCGKVWIPEPLASKLNILPHSSVRIKPVKSVIKVASSVRLQPLIPLPED
DDDEAIQTTFLNWLHSKSHEPLACLTPRSGTVLLHLNDAKLELSLTVLKPKPDNDRPDQL
FLLGPTVQKENIQVDRQTIAQPAPKAVLEAPEMELPSLQLFGGIDELIKTGFEFISHALL
GSPLSRELCTSGEGLKGGALLITGAKGSGKSSLARALCRKSREDLDAHVEVLDCKKLQGK
RADTVKQILQDMFEQAVWRQPSVVLLDDLDHLTRGATSPEHEHGPEALLQQHIAQSVCDM
VDEAVLHSSLVCLIITSQSEHSLHPSLTEIQGSHLIQGFVNIQPPDQAQRADILRHLILR
KPFLSEESLKDLDLEAVARKTEGYAAQDLTVLLERAIHANTMHRGHSNQGVCLSWRDFAH
ALSGFTPPSLWGVDLHTPGGVGLERVGGLQEVREQLMETILLPAKYPVLFSNLPIRHCSG
ILLYGAPGTGKTLLIRAVAKDSGMNFISIKGPELLSKYIGASEQGVRDVFLRAQAAKPCI
LFFDEFDSLAPRRGHDSTGVTDRVVNQLLTELDGVEGLQGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDQEARIEILKALSSGLSMTPDVDLQQLAAVTQQFTGADLKALLYNAQL
EAVHNSSGVSTSNELTSASDTDMSLSSMIFPNTSSGSDSSVGEGEQSLVLDQSLVLVEPT
ELHTEQEECHSNVWRFYFGSSFESETGNSPVSKQESLCVSGPNSRDPVRGLSPAYMSSIQ
TGYKELGPEQLEQLQQDIKIIKNSYRKGNDEFVWTRPASSQPGLLLSQAHISSALAVTRP
SLSPADWGKYTKLYESFGGSNDKSPPHATFTPGQRVTLA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtttagtagtcagggcattcaacctatcagagttgtttttaacaacgctaaa
aactgcttccttcacctcccgtcgaagatgatatcgcacctttcattacaggagaaccag
accttggagctgtcctgggacaatgcctctccagtgtacctcagctggacccaaaacagg
gcgtcctccgacccacacagcaacgacgttgagctgtgtcggcaaatgggagagaagctg
ggcttgaaagacggagaacaaggttttctaaaaccgtgccatcaagtctcatctttaaat
caggtgtttgtggagcctttgtcgtctgatgactgggagatcttggaacttcacagctct
gcattggagcagaagcttctggatcagatcagagtggttttccagcatggcgtgtttcct
gtttgggtgtacagtcatacagtaatctacattagaataacttccgtctccccgcttgtt
ccctacggtcgattggagcagttcacagagcttgtggtgtctcagaagatccgcactgga
aggagcaaagtcagtgattcagtgaggagatccaaccttgatgagcaatttcacttccag
cgaggctcgactttgccttccacgtcagagccctcgccagatattacctcacactctggt
cgcagccaggagtggggaggcatcgctgacctgaaaagcctgctccatcatataatacgg
ggcccttacgatcacgctcctgtgcccagcgtccctgttgtctttcccgactccatctac
agagtgtgcggtgtacctccggactgtctttgtactataagttacatcgctgctggtgtt
attcacattttttcttggagttctagtctgagcacagcaactagaggaggtcagtctgta
gtgacgtatggctgtcttttcaaggtatcatcccctaaaaaagcaaaagacaaagccaag
caggccttggagaaaaggaaggatgggggagggagcaaagatagcagcaggaaaggaggg
aaggatgcagaggaggcacaggaggaagaagccacaatagtcagggtcatgtgccatgat
ggtgagatgctggagagaggtcacaacaagatccactgtggaaaagtatggatcccagag
cctctggccagcaagttgaacatcctgccacattcatcagtgagaattaaacccgtgaaa
tcagtcatcaaagtagcctccagcgtccgcctacagcctctaatacctctgcctgaggac
gacgatgatgaagcgatccagacgactttcctcaactggcttcactcaaagagtcacgaa
cctttggcgtgtctgactcctcgctccggcaccgtcctcctacatctaaacgatgcaaag
ctggagttatctttgacagtgctgaaaccaaaaccagacaacgatcggccggaccagctg
tttctattaggacccaccgtccagaaggaaaacatacaggtggacagacagacgatagcg
caacctgctccaaaagctgttcttgaagctcctgagatggagctcccctccttacaatta
tttggtgggattgatgaacttattaagaccggatttgagtttatttcccatgccctgctg
ggtagtcccctctcaagggaactttgtacctccggagagggactcaagggaggagcactg
ctcatcactggtgctaagggtagtgggaagagctctttggcccgagccctctgcagaaaa
agcagagaggatttggatgcacatgtggaggtgttggactgcaaaaagctccaaggcaaa
agggcagacactgtgaagcagattctacaggacatgtttgaacaggcagtgtggagacaa
ccctccgtggtccttctcgacgacctggatcatttgacccgtggagccacatcacctgaa
cacgagcatggccctgaggcgctcctgcaacagcacattgcacaaagtgtgtgtgacatg
gtcgacgaggcggtgctccactccagcctggtatgtctgatcatcaccagccagagcgaa
cactccctccacccttctctcacagagatccaggggtcccacctcatccagggatttgta
aacatccagcctccggaccaagcgcagagagctgatatcctgcgccatctgatcctgagg
aagcctttcctctctgaggagagcttgaaagatctggacctggaggccgttgccaggaag
acggagggatatgcagcccaggatctcactgtgctgctggagcgagccatccacgctaac
acaatgcacagaggacacagcaatcaaggtgtctgtctttcatggagggattttgcgcat
gctctcagtgggttcacgcctccatcgctgtggggcgtggaccttcacacgccgggtgga
gtcggactggaaagagtgggagggctgcaagaagtgcgagagcagctgatggagaccatc
ctgctccctgctaagtatccggtcctcttctccaaccttcctatccggcactgctctgga
atccttctctatggagctccaggtaccggcaagacgcttctgatcagggctgtggccaaa
gacagcggaatgaacttcatcagcatcaagggacctgaactcctgagtaaatacattgga
gccagtgagcagggagttcgtgacgtcttcctgagggcacaagctgccaaaccttgcatc
ctgttcttcgatgagtttgactctctggcaccaaggcgaggccacgacagcacaggagta
accgaccgtgtggtcaaccagctgctcaccgagctggatggggtggaggggctgcagggg
gtgtacgtgctcgcagccactagtcgtccagatctaatagacccggccctgctgagaccg
ggacgactggacaagagtctctactgcccccctccagaccaggaggctcgtattgagatc
ctgaaggctctaagttctggcctttctatgactccagatgttgacctacaacagctggca
gcagtaacgcagcagttcactggggcggacctaaaggccctgctctacaatgcacagctg
gaggctgttcacaacagctcaggcgtcagcacgtcaaatgagctgacctccgcctcagac
accgacatgagcctgtcttccatgatcttcccaaataccagcagcggctcagactcctct
gtcggagagggagagcaaagcttggtgctggaccagtcgttggttcttgttgagcccacg
gagcttcacactgaacaggaggaatgccacagtaacgtctggaggttttacttcggaagt
tcctttgagtcggagactggaaactcaccggtttcaaaacaggaatccctgtgtgtctct
ggacccaactccagagacccagtcagaggactctctccagcttacatgtcctccatccag
accggatataaagagctcggccccgagcagctggagcagctgcaacaggacatcaaaatc
atcaagaacagctataggaaaggaaatgatgaattcgtgtggacgcgtccagcctccagc
cagccaggactcctgctgtctcaggctcacattagttctgccttagctgtgaccagaccc
tctctcagcccggctgactggggcaagtacaccaaactgtacgaaagttttgggggttcg
aacgacaaatcgcctcctcatgccacgtttactccagggcaacgtgtcacgttagcctga
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