Xiphophorus couchianus (Monterrey platyfish): 114155998
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Entry
114155998 CDS
T05908
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
xco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114155998 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114155998 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114155998 (nup153)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114155998 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
114155998
NCBI-ProteinID:
XP_027891954
LinkDB
All DBs
Position
13:complement(12399460..12417979)
Genome browser
AA seq
1514 aa
AA seq
DB search
MTAIRRRNIDRQSDERAMAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVP
SWLQKYFKNGDTPAGQTGQGTEQNCQPTPPPAPPNGNEEGPPPIDGRYSPEPSTSNTEPS
TSRASLNFQEYVLSRPPLSRSHLHFTPLDASSPTMGASSSLFSPPSTSSAPGPFSTGFSL
VKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEMDRTNSGPQQSQSS
LKKPSFNLSVFGNSSNSTLNSTLLNSSQLGDSPFYPGKTTYGGAAAVRSSRGRPGTPYQA
PVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAATAGSPSRSPSMDIL
NQDGPRHQAKKKRMDSNLPPVQKLVVPAAASVSGNRSVSFRPTLTPGGLTRALDRTPREK
TPTRQSPQLPEATPGPSQSTRSFSDPVYPLSSTPAASSLSSGGGKIRRERTTARPSSKHT
EEDEVAEAPVLPSISLPINKSSLPTFSFSPSLPPAISVSSSPSFTSTTPAKETLANKDPP
KASTPPCAPFTFSSPIVKATAASPPSYSPAVGFTFSAPVAKLAPSMSNGNLTAPTATAVK
PIASKSTEEFVGPFKPAKTLKQGSVLDLLKSPGFASPVVQNSLGTNTASQQTPTQPTTTP
SPGTSFSSSLPSPSGFGGLPSASAGWSCDVCLVQNKQSEIKCVCCQAPKPNSSPKSAESK
KTPAHSAGLQSSSTSTASASTTTVFGPIFSKPAGTWECDTCLVLNKSDAVKCVACETAKP
GTGLKPSLTFPPNFSAAKTASTPSDPVSTGISGFGDKFKKPEGAWECETCLVQNKAEDTK
CVACTASKPGASAAVSSAASSAPTFALLEQFKKPEGSWECDTCMVQNKAADVKCVACQTT
KPGATVEPKALGSFGSSAAGASGTSTFGSSTSNPGGFKFGTSDSTAGSGSFKFGTTDSSL
SSSSGGFKFGASFGSSSSESSSKDTTASSGFKFGGSSEGFKFGAASNEDKKSDQPAAGAG
LKFGGSSEVAFGSGSSSTESNSSSKSGFTFGLTKSADKTPETTTTSSSSITLTPLTSSRG
NSDKAGSSNDTTSTNTTTATAKGSVFGRLGDPNVASGTPQVSSTFGSLQAGKEPAAPTFA
FGKPEEKKEAAPSTFVFGAVKKEPEAAAAPSGGGFSFSKPSAPADQPPPAFTFGKQAEKS
ETSTSEASKPSFSFGQTAADSTAAPKPAFSFLANNPPSATTSSSATPTPAMFGAASSGST
PAPDATSSSSSSAPSTFVFGQPSSTTGDAPPAKNFMFGQNHDNQSAAPSSAPLNPAQPFI
FGASANAASAPAPAAPSFTFGAPAAAPPAASSSAPSAAPSPFVFSSAPSGGFGANQNPPF
ASGFGSPFPANPTQTFGAKPNAAPTFGQQNNATPVFGSSTNSAPSGGFQFGGASAFGASN
NSSGVFTFGPGAGAPSAPSANPPIAPQSGAAGGSFNFTQTPAFNIGSAKTFTASPAGQSG
IAGRKIKTAVRRRK
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacatcgatagacagtcagacgaaagagccatggcggcc
acgggtggagggaaaatcagaagcaggagatatcacatcgcttctaaaccttacgccaag
agtaaacagcagtcaggcctcatcagtcgagtgacagacacagtgaagagcatcgttcct
tcctggctgcagaaatacttcaagaatggagacactcctgcaggacagacaggacaagga
acagagcagaactgccaaccaacacctcctcctgctcctcctaatggtaatgaagaggga
cctcctcccattgatggacgctactccccagagccaagcaccagtaatacagaaccctcg
accagccgagcatccctgaactttcaggagtatgtgctttctcgaccacctctgagtcgt
tctcacctccattttaccccgctggatgcttcctcccctacaatgggggcctccagcagc
ctcttctctccgccctccacttcttcagcccctggccccttctccacaggcttctctttg
gtcaaagaaatcaaggacaacctctcgcaacacgaagacgataacatctccaccacgagt
gggttctcctcccgtgcatctgacaaggatgtcccaacttcaaaaaccgcgtcacttcct
cagctttggtctccagagatggacaggacaaactctggacctcagcagtctcaatccagt
ctcaaaaagccttctttcaacctgtctgtgtttggaaactcctccaattcaacgttaaac
agcacactgctgaactctagccagcttggagattcacctttctaccctgggaaaaccacg
tatggaggagcagctgcagtcaggagctcccgcggtcgtcctggcactccatatcaggcg
ccggtgagaagacagatcaaggccaaacctgccggcgctcagccctgcggcgtgaccagc
gccaccgccaggcgcatcctgcagtctttagagcgcatgtcgagcccactggctgatgca
aagagaatcccagcagccacagcaggctcgcccagtcgttctccatcgatggacatctta
aaccaagatggaccccgtcaccaggcgaagaagaaacggatggactcaaacctccctcca
gtgcagaaactcgtggttccagctgcagcttctgtttcaggaaatcgatccgtgtctttc
aggccgactttgacgcctggaggactcacccgagccctggacaggacgccaagggaaaag
acgcccacaagacaatcaccacagctacctgaagcaaccccaggtccatctcaaagcaca
aggagtttcagtgacccggtctaccctctgtccagcacccctgcagccagcagcctgagc
tccggagggggcaagatcaggagagaaaggaccacagcacggccttcctccaaacacact
gaagaagatgaggtggctgaagcaccggtccttccaagcatttcactaccaatcaacaaa
tcatctttgcctacgttcagcttctctccatctttaccacctgccatctctgttagctcc
tcccctagcttcacatccactactcctgcgaaggagacactcgcaaacaaggatccacca
aaggcctccacaccaccctgtgcacctttcacattttcctctcctattgtcaaggcaact
gcagccagcccaccttcttactcccctgctgttggtttcaccttcagtgcacctgtagca
aagctggcgccctccatgtcaaacggaaacctgacagcacccacagcaacagctgtgaaa
cctatagcaagcaagagcacagaggaatttgtaggacctttcaaaccggccaagaccttg
aagcagggcagcgtgctggatcttcttaagtcacctggttttgcttctcctgttgttcaa
aattcccttggcaccaacaccgcttcccagcagacacccacccaacccacaaccactcct
tcacctggcacaagcttctcctcttcgctaccttcgccatcagggtttggtggtttgccc
agtgcctcagcgggctggagctgtgacgtgtgtttggttcagaacaagcaatcggaaata
aagtgcgtttgctgtcaggccccaaagccgaactcctcaccaaaatcagcggagagcaaa
aaaactcctgcccattcagcagggctacagagcagcagcacaagcaccgcctccgcctcc
acaacaacagtatttggcccgatcttctccaaacctgcaggaacctgggagtgtgacacg
tgtctggtcttgaacaaatctgacgcagtgaagtgcgtggcctgtgaaacggccaaaccc
gggacggggctcaaaccgtcgctcactttcccccccaacttctcagctgctaagactgca
tctacaccctcagacccagtttccactgggatcagtgggtttggagataagttcaaaaaa
ccagagggtgcgtgggaatgtgaaacatgtttggtacaaaacaaggccgaggacacaaag
tgtgtggcctgcacggcttctaaaccaggagcttcggcagccgtcagttcagcagccagc
agtgccccaacgtttgctcttttagagcagttcaagaaaccagaaggatcatgggaatgt
gacacctgcatggttcagaacaaagctgctgatgttaaatgtgttgcttgtcagacaacc
aaaccaggagctacagtggaacccaaagccttagggtcttttggctcctcagctgctgga
gcttctgggacctccacttttggctcttctacctctaatcctgggggttttaagttcggc
acgtcggacagcacagccggatctggcagtttcaagtttggaactacagactcatcatta
tcttcatcgtcaggtggattcaaatttggagcctcgttcggaagctcctcctcggagtcg
tcctctaaagacactactgcgtcttcagggtttaaattcggtggatcctctgagggcttc
aaattcggagcggcgtccaacgaagacaagaagtcggaccagccggcggcgggtgctggg
ttgaagtttggaggcagcagcgaagtagcttttggaagtgggtcatccagcacagaaagt
aactcttcttctaaaagtggcttcacgtttggactgacaaaatcagcagataaaacgcca
gaaaccaccaccacgtcttcatcctctattaccttgactcctcttacttcttcacgagga
aatagtgacaaagcaggatcatcaaatgacaccacatcaactaacaccaccacagccacc
gctaaggggtctgtttttgggagactaggcgatccaaatgtggcatctggcacaccacag
gtgagctctacatttggatctttacaggcagggaaggagccggcggctccaacgtttgcc
tttggaaagccagaagagaagaaggaggcggctccgtcgaccttcgtctttggtgctgtg
aaaaaggaaccagaggctgctgctgctccctcgggaggcggcttctccttcagcaagccg
agtgcgccagcagatcagccgccgccggctttcacattcggcaaacaggcagaaaagagt
gaaacgtcgacttcagaagcctcaaagccgtctttcagctttggacaaactgctgcagat
tccactgctgctccaaaaccagccttttctttcctggctaataacccacccagcgccacc
acctcgtcatccgccaccccgactcccgccatgtttggcgccgccagcagcggctccaca
ccagcaccggacgcaacttcgtcttcatcctcctcagctcccagcacgtttgtgttcggc
cagccttcctccaccaccggtgacgctccccctgctaagaacttcatgtttggacagaat
catgacaaccagtcagcggcaccgtcgagtgctccgctgaacccggctcagccctttatc
tttggcgcttctgccaacgctgcttctgctcccgctcctgctgctccctcttttaccttt
ggagccccagcagcagcgccccctgctgcttcctcatcagctccatctgcagccccgtca
ccgtttgtgttcagttcagctccttcaggaggttttggtgccaaccagaatcctcctttc
gcatcaggttttggatcccccttcccagccaaccctacccaaacctttggagccaaaccc
aacgctgcccccacgtttggacagcagaacaacgccacacctgtgtttggttccagcacc
aactccgcacctagtggaggctttcagttcggaggagccagtgcttttggagcctcaaat
aactcttcaggcgtgtttacgtttggacctggagctggagcgccttctgccccctccgcc
aatccccccatcgcaccccagtcaggagcagctggtggcagtttcaacttcacacaaact
ccagcatttaacatagggtcagctaagacattcaccgcctccccagctggacagtcaggg
atcgctgggcgcaagatcaaaactgcggtgcgccgcagaaagtag
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