Xiphophorus couchianus (Monterrey platyfish): 114156017
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Entry
114156017 CDS
T05908
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114156017 (thrb)
04081 Hormone signaling
114156017 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114156017 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114156017 (thrb)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114156017 (thrb)
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
114156017 (thrb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
114156017
NCBI-ProteinID:
XP_027891980
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Position
13:28349467..28447670
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AA seq
415 aa
AA seq
DB search
MSEPAEKCSPRWKDEAVQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTAWDRLEPTQEEWELIRLVTEAHMSTNAQGSHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKDTKPEDCGQASMVNAAEENKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLASFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcctgcagagaaatgctccccccgctggaaggatgaggctgttcaaaacggt
tacataccgagctacctggacaaggatgagctgtgtgtagtgtgcggggacaaagccaca
ggctaccactaccgctgcatcacatgcgaaggctgcaaggggttcttcaggagaaccatt
cagaagaacctgaacccaacctacgcctgcaagtacgaggggaagtgtgtcatcgacaag
gtgacgaggaaccagtgccaagaatgtcgcttcaagaagtgcatagcggtaggaatggca
acagacttggttctggacgacagcaagaggctggccaagcggaagctgatcgaggagaac
cgggagcgccggcggaaggaggagctgcagaagacggcgtgggaccgactggagcccacc
caggaggagtgggagctcatccgcctggtgacggaggcccacatgtccaccaacgctcag
ggcagccactggaagcagaagaggaaattcctggtcgaggaagcaatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcaggggtgaaggacactaag
ccagaggattgtggtcaagcctccatggtcaatgcagcggaggaaaacaaagtggatatt
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgccaatgttctgtgagctgccttgtgaagaccagatcatcctgctgaaa
ggttgctgcatggagatcatgtcgctgcgagcggccgtacgctacgacccggacagcgaa
accctcacgctcaacggggaaatggcagtgactcgaggtcagctgaaaaacggaggactg
ggcgtggtgtcggatgccatctttgatctgggcgtgtcgttggcctccttcaacctggac
gactctgaggtggctctcctgcaggctgtaatccttctgtcatccgatcgtccaggcctg
accagcgtggagcgaatcgagcgctgccaagaagagttcctgctggccttcgaacattac
atcaactaccgcaagcacaaggtggcgcacttctggcccaagctgctgatgaaggtgacg
gaccttcgcatgatcggcgcctgccacgccagccgcttcctccacatgaaagtggagtgt
cccaccgagctgttccctccgctcttcctggaggtcttcgaggactga
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