Xiphophorus couchianus (Monterrey platyfish): 114156029
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Entry
114156029 CDS
T05908
Symbol
jarid2
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114156029 (jarid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114156029 (jarid2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114156029 (jarid2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
114156029 (jarid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
114156029
NCBI-ProteinID:
XP_027892002
LinkDB
All DBs
Position
13:complement(13152238..13265661)
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AA seq
1444 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVMRKVLYLSLKEFRTAQKRQLDGDGPTNLNGSL
ANGQLNGSVSKGCHKEDGSLRSQGLHGSNKYGEDSPAKKRPRLQAQRKFAQSQPNSPSTT
PVKVADTGNMNGNLSTAPSTSLSSLSSSSLSSSIQDLSRRKPKTEDFLTFLCLRGSSALP
SNMAYFGSSQEEEDLEEEEDEEEEEVRNSAGVHTQGAGGSSQASASSSCNSTPRKGKLPT
RQPLNGHVFNNHSKAGTRESPRPKAGTHSRDAPAPPPPPPPPLLRERSERAEAREHAREL
QALASSRGTANGLPSRRAAEELRKQVSKVNGMTRAGSAQAVGGAKKSHDLRLPSKTVKKY
TATVSKGHVTYTKAKQKELGKKTKLSSSNKHNSAASASSSANNHNQHSQPAASNRLANSG
KAAAPAHHSNAKTRKQVLLSNGLHKAVVNMRPNGRLNGQWHNASAKEDGQKQCQQGHGEC
PGREGLRNSKRRLEVVLNSVSTGVVVQKAKTSGSEAKKAKLQPAPLETRSSSKKVANDEK
AAKQNSTPTTPISNGHDAEKPTPPKQTQPATPLSPSSPPPQQTPPPSTPAANVEPVNQRP
KRASAGKLMLIRQAQQQQSRLHGRSSSSSPSVGYNNTPNPSRASTTSDPQQISASSPSSC
NDSSTLPSTNGPGQIKPAALRLADRDKEWEHEKELTRQKEREQEKERERQRSKPEGWAAL
GEVPVFRPSQREFQDPLVYLDAVREQAEVAGMCRVVPPQDWRPECKLNEEMRFVTQVQRV
HMLGRRWGPNVQRLACIRKHLKSQGITMDEPPVIGGCEVDLSRFFQLINDMGGMQQVMDL
KKWTKLADLLRIPKSAQDRLAKLQEAYLQYILSYDSLSAEERLRLLGDVLQEKKNLESRQ
GPLEGLSDSAAHALPRYEPKNGLVGGIVGGTTGNHRTNGVYHRLKCLKELEAQVKAGRRR
LFAQEKQGKEDRHNGEQRMEEDRGILSDQYKCIYKGKSVSLTNFFRIARNTMTMCFNKEP
GAAEVEQEYWRIVEQRDAHVAVHCGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGS
ILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKAKLD
KVVHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVYRTVQRSGQFVVCFPGAFVSKVCC
GYSVSETVHFATPHWMNLGYQAAKDLKFRCIAKPFSMEKLLYQIATAESKRDNGLLLTTI
STLLKDLRNIELHQRQELYNAGLLSSARYGTHDGNLCPTDGRKKPRGKWLALESLERRCQ
ICQHLCYLSMVVQETDNVVFCLECALRYVEKHKSCRGLKMMYRYDEEQINSLVNQVCGRA
MLKNGGVGVGGGAVIVSGGGGDSCHTLSPAKASPAKRGPRKRATVEVSLARLSSIHMPKA
AAVS
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacctaagaggaatatcatccagaagaaatacgatgacagtgatggg
atcccgtggtcagaagaacgggtgatgcgaaaggtgctttacctctccctgaaggaattt
aggactgcacagaaacggcagctggatggcgatggacccacaaaccttaatggttctctt
gccaatgggcagctgaatggctcggtgtcgaagggctgccacaaagaagatgggtccttg
cgctctcagggcctccatgggagcaacaaatatggcgaggacagtcctgcaaaaaagagg
cctcgactccaggctcagcggaagttcgcccagtcgcagcccaactcgcccagcactacg
ccggtcaaagtggccgacacaggcaatatgaacggcaacctgtccaccgctccgtcaacg
tccctctcgtcgctctcctcctcctccctgtcctcctctatccaggacctctcccggcgc
aagcccaagacggaggacttcctcacgttcctctgcctccgaggttcctctgccttgccc
agtaatatggcctattttggaagctcccaggaggaggaggacctggaggaggaagaagat
gaggaggaagaggaggtgcggaacagcgcaggagtgcacacacaaggtgcagggggcagc
agccaagcctcggcctcctcctcttgcaactctacacctcgcaagggcaaactccccacc
aggcagccgctcaatgggcacgtttttaacaaccacagcaaagcagggaccagggagagt
ccgaggccgaaggcgggcacacacagcagggacgcacccgctcctcctccgccgcctcct
ccacctctactgagggagcgcagcgagcgggcggaggcgcgagagcacgccagggagctc
caggccttggccagcagtcggggcaccgccaacgggttgccgtcaaggagagcggctgag
gaactacggaagcaggtctcaaaagtgaatgggatgacgcgggctggctcggcacaagct
gtcggtggtgccaagaagagccacgacttacgactgccgtccaaaactgtgaagaagtac
acagccaccgtgtccaagggccacgtcacctacaccaaagccaaacagaaagaactgggc
aagaaaaccaaactcagcagcagtaacaaacacaacagcgccgcctcggcatcatcgtca
gcgaacaatcacaatcagcacagccagccagcagccagcaataggctggccaactcagga
aaagcagcggcaccagcccaccacagcaatgcaaaaacccgcaaacaggtgctattatca
aacgggctgcacaaagcggtggtcaacatgcgacccaacggcaggctaaatgggcaatgg
cacaatgcctcagccaaggaggacgggcagaaacagtgccagcaaggccacggggagtgc
ccgggtcgagagggactgcgaaactccaagcggcgtctggaggtggtgcttaactctgtg
agtacgggggttgttgtgcagaaagccaaaacgagtggctccgaggccaaaaaggccaag
cttcagcccgcaccactggagacacgcagcagcagcaagaaggtggccaatgacgagaaa
gctgccaagcagaacagcacccctaccactccaatttctaatggacatgatgcagagaag
cccaccccgcctaaacagactcaacctgctactccactttcaccttctagtccaccgcct
caacaaacgccacctccttctacaccagcagccaacgtggagccagtgaaccagcgaccc
aagcgtgcatcggccggcaagctgatgttgatacgacaagcacagcaacagcaaagcagg
ttgcatggtcgcagctcctcctcatccccctcagtaggctacaataacacaccaaacccc
agtcgagccagcactacctcagaccctcaacaaatctctgcctcctctccctcgtcctgc
aacgactcatctactcttccttccaccaacggcccaggccagatcaaaccagcagcgttg
cggctcgcagaccgcgacaaggaatgggagcacgagaaagagctgacgcggcaaaaggaa
cgtgagcaggagaaggagcgggagcgccagcggagcaagccagagggctgggcggcgctg
ggcgaagtgcctgtcttccggccctctcagagggagttccaggaccctctggtgtacttg
gacgcagtgagggaacaggccgaggtggctggcatgtgccgtgtggtgccaccgcaagac
tggcggccagagtgcaagctgaatgaggagatgcgctttgttacacaggtgcagagggtc
cacatgctgggccgacgctggggcccaaatgtgcagcggctggcttgcatccgcaagcac
cttaaatctcagggcattaccatggatgagccaccagtcattggtggctgtgaagtggac
ctgtcacgtttttttcagctcatcaatgacatgggcggcatgcagcaggtcatggacctg
aagaagtggaccaagcttgccgacctcctccgaatccccaagtcagcacaggaccggctg
gccaagctacaggaggcgtatctccagtacatcctctcctatgactctcttagcgccgag
gagcgcctccggcttctgggtgatgtgctgcaagagaaaaagaacctggagtcgcgccag
ggcccccttgagggcctctcggattctgctgcgcacgccttgccacgctacgagcccaaa
aatgggttagtgggcggaatagttggagggacgaccgggaaccatcgcaccaacggagtg
taccaccgtctgaaatgtctgaaggagctggaggctcaggtcaaagcgggccgacgccgg
ctcttcgctcaggaaaaacaaggcaaagaggacaggcataacggagagcagcgaatggag
gaggaccggggcattctcagtgatcagtacaagtgtatttacaaggggaaatcggtttcc
ttgaccaacttcttcaggatagcccggaacaccatgaccatgtgctttaataaggaacct
ggagctgctgaggttgagcaagaatactggaggatagtggagcagagagacgcccacgtg
gcagtccactgtggaaaggtggacaccagtacacacggcagtggtttcccgacaggaaaa
tcagagccattttcaaaacatggatggaacctcactgtcctcccaaataattctggatcc
atactgaggcatctgggtgctgtgcctggggtgaccattccctggctaaatattggcatg
gtcttttctacctcatgctggtctcgagaccaaaatcgccttccatatattgattactta
cacactggtgctgactgcatttggtattctgtccctgctgaggagaaggccaagctggac
aaggtggtccatacactgcttcaagccaatggcaccccaggactagaaatgctggagaag
aatataatgatctctccagaggtgctgtgccgtgaaggcatcaaggtttaccgtacggtc
cagcggagtggccagtttgtggtttgcttccccggtgcctttgtctctaaagtgtgctgt
ggctacagcgtgtcagaaacggtgcactttgccacgccacactggatgaacctgggttac
caggctgcaaaggacctgaaatttcgttgcatagccaagcctttctccatggagaagcta
ctgtatcagatcgccaccgctgagtccaagagggacaacggccttctcctcaccaccatc
tccaccctactcaaagacctcaggaacatagagttgcaccaacgtcaggaactttataac
gcaggtttgctgtcctctgcccggtacggcacgcatgacggcaacctctgccccactgac
gggcgcaagaagccccgcgggaaatggctggcactggagtccttagagagacgctgccaa
atctgtcaacacctctgctacctgtctatggtggttcaggagacggacaacgtggttttc
tgtctggagtgtgcactacgctacgtggagaagcacaagtcctgcaggggccttaagatg
atgtatcgatatgatgaggagcaaatcaacagtttggtgaaccaggtgtgcggtagggcc
atgttaaagaacggaggagtcggcgttggaggaggagccgtcattgttagcggaggaggg
ggagactcttgccacactctaagccccgccaaagcatcgccagccaagcggggcccccgg
aagcgcgccactgtggaggtgtccctggcccgcctgtcgtccatccacatgccgaaggcg
gcggccgtgtcctga
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