Xiphophorus couchianus (Monterrey platyfish): 114156039
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Entry
114156039 CDS
T05908
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04148
Efferocytosis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114156039
04310 Wnt signaling pathway
114156039
04020 Calcium signaling pathway
114156039
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114156039
09143 Cell growth and death
04218 Cellular senescence
114156039
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114156039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114156039
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
114156039
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
114156039
NCBI-ProteinID:
XP_027892032
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Position
13:complement(26453855..26482806)
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AA seq
755 aa
AA seq
DB search
MKSAEEDAFGFLPSVSLSGPLASQFLQSSPTISVSVAKPETFDPRDDPQTAGFYPPVCPD
VGAALEGPRIEITAYGQSPEDEPQRGGIPAARRVASIVTLPLPGADLYRDPSCLSPASSV
SSRSGLSDASFESGFSYNYDNSPQNSPWQSPSVSPKGSTLALPEDAAATSPRADATDDGW
TVPRGSGPGSPCGAKRKYSLNGFPPPPPDPSPRASPRLSLAEDSWLPITNQYTNSAILAA
INALSTDGMADLGDGVPIKARRTSLELSPTVGLKLEPQQDERPALKKEGYFLDVPQNPFG
WTKPKQFLSPSLPALDWQLPSSSGAYSLQIHVQPKSHHRAHYETEGSRGAVKALAGGHPA
VQLHGYMESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTPSHEVLHNNTKVLEIP
LLLENDMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHITQPGGRTVSLQV
ASNSIECSQRSAQELPLVDKQSLETSPAPGGGTMVLDGLNFQHDSKVLFVEKAQDGHHVW
ESEAAVERDALRPNSLLVEIPPYRTQRLAAPVHVNFYVSNGKRKRSQLQRFSYVPTDVPT
IKTEPHDDYGAALLCSQHAPLHPKAYYGAQVAPPVTSNPRPCVVGGAYGRSPSSSPKLPD
LSPFSRPPPAHASIIQEAPRRLPSPADSPTSTSTPLPQTPARPAGPPQAPEPAGRVREGG
VSIKEEPQELDQMYLDDVNEVIRNDLSSDPAHSRA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgcagaggaagatgccttcggcttcttgcccagcgtcagcctctccggccct
ctggcctcccagtttctccagtccagccccaccatttccgtgtccgtggcgaagcctgag
acctttgacccccgtgacgacccgcagacggccggcttctacccgccggtgtgcccggac
gtcggcgcggccctggaggggccccgcatcgagatcacagcctacggccagtcgcctgag
gacgagccgcagcggggcggcatcccggccgcccggcgggtcgcctccatcgtgacgctg
ccgctacccggcgccgacctctaccgcgaccccagctgcctgagcccggccagcagcgtg
tcgtcccgcagcgggctctcggacgcctctttcgagtccggcttctcctacaactacgac
aactcgccccagaactcgccctggcagtccccttccgtgtccccgaagggctccaccctg
gccctgccagaggacgccgccgccacctccccccgcgccgatgcgacagacgacggctgg
acggtgccacgagggtccgggcccggctcgccctgcggagccaagaggaagtacagtctg
aacggcttcccgccgccgccccccgacccctcgccccgcgcctcgccccgcctcagcctg
gcggaggacagctggctgcccatcaccaaccagtacaccaactctgccatcttggccgcc
atcaacgccctctccaccgacggcatggccgacctcggcgatggcgtccccataaaggcc
cggagaaccagcctggagctcagccccaccgtcggcctgaagctggagccacagcaggac
gaacgcccggccctgaagaaggaaggctacttcctggacgttcctcagaacccattcggc
tggacgaagcccaagcagttcctcagcccgtctctgccggcgctggactggcagctgccc
agcagctccggcgcctacagcctgcagatccacgtccagcccaagtcgcaccaccgggcg
cattacgagacggagggcagccgcggcgcggtgaaggcgctggccggcggacacccggcg
gtccagctccacggctacatggagagcgaacctctgaccctacagctcttcatcggcacg
gctgacgaccggctgctgaggccccacgccttctaccaggtccaccgcatcacgggaaag
acggtgtccacgccgagccacgaggtactgcacaacaacaccaaggtgctggagatcccg
ctgctgctggagaacgacatgcgcgccataatcgactgcgcgggaatcctgaagctccgt
aactccgacatcgagctgaggaagggcgagacggacatcggccggaagaacacgcgcgtt
cggatggtgttccgggttcacatcacccagccgggcggcaggaccgtctctctgcaggtc
gcatccaactccatcgagtgctcccagaggtcggcgcaggagctgccgctggtggacaag
cagagcctggagacgagcccggcccccggggggggcaccatggtgctggacggactcaac
ttccagcacgactccaaggtgctgtttgtggaaaaggctcaagacggccaccatgtctgg
gagagcgaggccgcggtggagagagacgcgctgaggccgaactcgctactggttgaaatc
ccgccgtaccggacgcagcgcctcgccgcccccgttcacgtcaacttctacgtcagcaac
ggcaagaggaagcggagtcagctgcagcgcttctcctacgttcccaccgacgttccgaca
ataaagacggagccgcatgacgactacggcgccgccctgctgtgcagccagcatgcgccg
ctgcacccgaaggcatattacggcgcccaggtcgcccccccggtgacctccaaccccagg
ccgtgcgttgtgggcggggcttacggccgctcgccctcctccagccccaaactgccggat
ctgtctccgttctccaggccgccgcccgcccacgcctccatcatccaggaagccccccgc
cgcctcccctcgcccgcagactctccaacctcgacctcgaccccgttgccccagaccccg
gcccggcccgctggccccccgcaggcccctgaacctgcagggcgggtccgggaggggggc
gtcagcatcaaggaagagccgcaggagctggaccagatgtacctggatgacgtcaacgag
gtcatcaggaacgacctgagcagcgaccccgcccacagccgcgcctaa
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