Xiphophorus couchianus (Monterrey platyfish): 114156059
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Entry
114156059 CDS
T05908
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114156059
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114156059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114156059
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
SR proteins
114156059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
114156059
NCBI-ProteinID:
XP_027892065
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All DBs
Position
13:26144369..26149312
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AA seq
377 aa
AA seq
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MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYTGGRSGYGRWGGRDRYGPPVRTDYRLIVENLSSRCSWQDLK
DYMRQAGEVTYADTHKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIEDRPGARR
RRSYSRSRSRSRSRSRRSHKSRSRSDSSSRSRSRSRSRAASRSRSRSKKNKSKSKKDEEE
RNGAAKDDERSRSRSRSRSPRSKKSKKDGKSAKKDESRSRSRSASRSRSRSRSRSRSRSG
SKDRPRKSGSQDGEPPKSDVEAADAERPSRSPEELRAGSKSKSQSASPAKAGSRSRSASR
SESRSKSRSQSRSRSRS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggtctacatcggtcggctgagctacagagccagggagaaggacgtggagagg
ttcttcaagggttatgggaagattctagaagtggacctgaaaaatggctacggctttgta
gagttcgatgaccctcgtgatgcagacgatgccgtgtacgacctgaacggcaaagagctg
tgtggggagagggtcattgtggagcacaccaaggggccgcggcgggacgggggctacacc
gggggccgcagtggctatgggcgctggggaggcagggacaggtacggcccacctgtccgc
accgattaccgcctcatagtggagaatctgtccagccgctgcagctggcaggacctgaag
gactacatgaggcaggcgggtgaggtgacgtacgccgacacccacaaaggccgtaagaat
gagggcgtgatcgagttccggcagtactcggacatgaagcgggccctggagaagctggac
ggaaccgaggtcaacggcaggaagatccggctcatcgaggaccggcccggcgcccggcgc
cgccgctcgtactcccgcagccgctccaggtcccggtccaggagccgccggtcccacaag
agccgcagccgcagcgatagcagcagccggtcccggtcccggtcccgctccagagccgct
tcccgcagccgcagccgcagcaagaagaacaagagcaagagcaagaaggacgaggaagag
cgcaacggcgccgccaaggacgacgagcgcagccgcagccgcagccgcagccgcagcccc
aggagcaaaaagagcaagaaggatggcaagtctgccaagaaggacgagtcccggtcccgc
tccaggtccgcctcccgctccagatcccggtcccgctccaggtcccgctccaggtctggc
tccaaggaccggcccaggaagtccggctcccaggacggcgagccgcccaaaagtgacgtg
gaagcggcggacgccgagcggccgtcccgctccccggaggagctcagagccgggtccaag
tccaagtcccagtccgcatctccggccaaagccggctccaggtcccgctccgcctcccgc
tcagagtcccgctccaagtcccggtcccagtcccgttcccgctcccgctcctag
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