KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156083
Entry
114156083         CDS       T05908                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114156083 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xco03041]
    114156083 (sf3b4)
Spliceosome [BR:xco03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114156083 (sf3b4)
 Complex B
    114156083 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    114156083 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 114156083
NCBI-ProteinID: XP_027892088
UniProt: A0A3B5N0H9
LinkDB
Position
13:13644991..13648281
AA seq 391 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPTPVLTAMGTGIPIPGLPPP
GAFPPVPPPGTMPPAMPPSMGMPPTAGGVPPGSAGGHPPGPPPFPPGNMPPGMPQMPMPP
PAPPGMVPPPPAPPGSAQRAPLPPNMPPPPMGMPPRAPYPMAPPVPPGMRGPPPPMPPPG
YGAAPPRPPPFGFQRAPPMPPRPPGAPPRVP
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcggaaagaaatcaagatgcgactgtgtatgttggaggcttg
gatgagaaagtgtcggagccgttactgtgggagctgttcctgcaggccggtcctgtggtc
aacacacacatgcccaaagaccgggtcactggtcaacatcaaggttatggctttgtggag
tttcttagtgaggaggatgctgattatgccataaaaatcatgaatatgatcaaactctat
ggcaaaccaattagggtcaataaggcctcagcacacaacaaaaacctggacgttggtgca
aacatcttcatcggtaatttggacccggagattgatgaaaaacttctctacgacacgttc
agtgcgtttggtgtgatcctccaaacaccgaagatcatgcgagaccccgacacaggcaac
tctaagggttacgctttcatcaattttgccagttttgacgcttcggacgcggctattgag
gccatgaacggccagtacctctgcaacagacccattacggtgtcgtacgcatttaaaaag
gattccaaaggggaacgccacggttcggccgcagagcgactgctggctgcacagaacccg
ctctcccaggccgacaggccgcaccagctgttcgcagatgctccgcccccgccgtctgca
ccaacaccagtcctcactgcgatgggaacaggaattcccattccaggtctcccgcctcct
ggtgcgtttcctcctgttccccctcctggaacgatgcccccagcaatgccgccttctatg
ggcatgcctccaacagcaggaggtgttccgccagggtctgccggtggacatccacctgga
ccaccaccgttccctcctggcaacatgcctccaggtatgcctcagatgcccatgccacct
cctgctcctcctggcatggtgcctccacctcctgctcctccaggatcggctcagagggct
ccgctgccccccaacatgccaccaccaccaatgggcatgcctccccgggcaccatacccc
atggctcctcctgtgcctccaggtatgcgagggcctcctcctcccatgcctccgcctggc
tacggcgcggctcctcctcgtccgcctccttttggttttcagagagctcctccgatgcca
cccaggcccccaggtgcccctcctcgggtgccttaa

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