Xiphophorus couchianus (Monterrey platyfish): 114156161
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Entry
114156161 CDS
T05908
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114156161
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114156161
Membrane trafficking [BR:
xco04131
]
Protein recycling
Others
Others
114156161
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
114156161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
VirE3
USP7_C2
Motif
Other DBs
NCBI-GeneID:
114156161
NCBI-ProteinID:
XP_027892235
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Position
13:16293294..16327468
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AA seq
561 aa
AA seq
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MADVGDYEIRPAHPTASRYNGPVVGSSAGQNAATVTSGPRIVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVNVEGATHKQVVDLIR
AAEKELILAVLSVPPQEADGLEGGEDVQPNYDYSDKQAVPISIPMYKHVEQHSERFVVYN
VYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEYLE
RVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRIRKNSTTDQVYQAL
VLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSV
QEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCEGY
NEVVFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGM
AFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEESDKDNKNCSNNEY
LPPLETQQKGWRPLGGEIATS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtcggagactatgaaattcggccggctcaccccacggcgtcccgctacaac
ggtccggtcgtcggttcgtccgcgggccagaacgcagcaacggtaacgtctggtcctcgg
atagtgcggatcgtcaagtcggagtctggctacggtttcaatgttcgcggtcaggtcagc
gaaggagggcagcttcggagcatcaacggggaactgtacgctcctcttcagcacgtcagc
gctgttctacccggaggtgcagcagaccgagcggggatagcgaagggtgacaggatcctt
gaagtgaatggggtgaacgtggaaggagcgacccataagcaagtggtggacctgatccgt
gcagcggagaaggagctgattctggccgttctgtccgttccaccccaggaagctgatgga
ttagaaggaggggaggatgtccagccgaactacgactacagtgacaagcaggcggtgccc
atttcaatccccatgtacaaacatgtggagcagcactcggagaggtttgtggtgtacaac
gtgtacatgtcaggcagacagctgtgctcgaagcgctatagagagtttgccatcctgcac
caaaacctgaagagggaattctcaaacttcaacttcccaaagcttcctgggaaatggccc
ttctccctgtccgaacagcagctggacgctcggcgcagaggcctggaggagtacctggag
cgagtgtgttctgtgcgggtgataggggagagtgacatcatgcaggagtttctctctgaa
tcagatgagaactacaacggagtcacagacgtggagctgcggatagcgctgcctgacaaa
accaccatctctgtgcggattcgtaaaaacagcacaacggaccaggtgtaccaggcatta
gtgctgaaggttggaatggacagtattatggcaagctactttgctctttttgaagtcatc
aaccattcttttgtgaggaaactcgctccaaacgagttcccccacaagctttatgtgcag
aactacacatccgccgttcctgggacgtgcttagcgctccgcaaatggctgttcagtgtc
caagaagaagagctgctcagagacaacccgctggcactacactactgcttccatcaggca
ctggacgatgtgaagaagggattcataaaaacagaggacaaatcctaccagctgcagaaa
ctggcagagcagcgcaagatggccacatacctgagcctgctgcggacatgcgagggctat
aatgaggtggtcttcccccactgctcctgtgactccaggcggaagggccatgtcatcacc
gccatcagcatccatcacttcaagctgcacgcgtgcaccgaggacggcacgctggagaac
caggtaatagcttttgagtgggcagagatgcagcgctgggacactgacgaggaaggcatg
gctttctgcttcgagtacgccagaggagagaagaaaccgcgctgggttaagatttttact
ccatatttcaactacatgcatgaatgctttgagcgtgtcttttgtgagctgaagtggagg
aagcaggtggaggaagaggaatctgataaagacaacaaaaactgcagcaacaatgagtac
ctgcctcctctggagacgcaacagaagggatggcgccccctagggggggaaattgcaact
tcctaa
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