Xiphophorus couchianus (Monterrey platyfish): 114156218
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Entry
114156218 CDS
T05908
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114156218
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114156218
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114156218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
Ank_2
IBR_2
Ank
Ank_5
UBA_ARI1
Ank_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
114156218
NCBI-ProteinID:
XP_027892313
LinkDB
All DBs
Position
13:complement(12265193..12287011)
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AA seq
1262 aa
AA seq
DB search
MGNTATKFRKALVSGDEALAWQLYEGNPQFRDSLDPNASYGEQYQHNTPLHYVCRHAMTR
LLRSFLFSKEGNPNKRNVHNETCLHVLCQGPQILLLPEGALSPRLARPQRDKQRRADCLQ
MILSWTGARLEGGQYEKANVNATDNHHSTCLHYAAAAGMKSCVELLIQSEADLFVEDEDK
LTPCDHAERHHHTDLALSLESQMVFSCSSARQSNGDAHGESRLPQYKEPYEGLKIQDLRR
LKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSDAEGCCQRSGVTMPTPPPTG
YNAWDTLPSPRTPRTPRSPLTLTLTSPTDSCLTPGEEGLATCGICLCSISVFEDPIDMSC
GHEFCRSCWEGFLNIKIQEGDAHNIFCPAYECYQLVPVHVIESVVSREMDQRYLQFDIKA
FVENNPSIRWCPAARCERAVRLTRPGPGDSDPHSFPLLPSPAVDCGKGHLFCWECLGEAH
EPCDCQMWRNWLQKVTEMKPEELAGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCN
HMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQLEEQSKEMTVEAEKKHKSFQ
ELDRFMHYYTRFKNHEHSYKLEQKLMKTAKEKMEQLSRAFISREGTPPDTRFIEDGVTEL
LKTRRVLKCSYPYGFFLQQGSTQKEIFELMQTDLEMVVEDLAQKVNRPYLRTPRHKIISA
ARLVQQKRQEFLASVARGVAPNDSPDPPRRNYPGGSWEWEYLGFASPEMGSRHSVLGAGD
HRERQSQDYADIQYRRRHRPRRRGDMLSLHNLRSSSNTPETSRRSDNADPAERTEGRRRA
LGSLDEDDPNILLAIQLSLQESRREQGLDGGAERRPGTVGDLADVALHSLNMEDPPGARG
PSFPTSLLDPPRPPNRTDSTAMQPSVLSSLPLPPPPPTLSAELLELGDSLMKLGNITTPY
MDPEPACSRGALAAPYSDCSHRPDQNTSTPHAILDQIAVTDPHHDSKQPSYSGSYSVESE
HTASCALDCSHNPPHPSAYGRDPDEAERSYQPGSSYTAEHPSTYALDPPRSDPQPPVQLC
LPSPELEPELLLSPVIPPGGPFTPSDPQSLQALDPTASAQLLDNIMAWFNNNINPQNNPQ
NLALIPSPPTTETDSSPDTHASAEKDGTAAPVWQPLEGTPRAAASGGREAPKRPDSLELE
NRDVREEGVSAGCVSDLSLDEEHTHPRSHGQADPAAESEADTVLQLEGGGSSEKWEEQEH
LV
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacacggccaccaagttccgcaaggcgttggtgagcggcgacgaggcgctggcc
tggcagctgtatgagggcaaccctcagttcagggacagcctggacccgaacgcatcatac
ggagagcagtaccaacacaacacacctctgcattacgtatgccgccatgccatgacgcgg
ctgctcaggtcgttcctgttcagcaaagaggggaacccaaacaagcgtaatgtgcacaac
gagacatgcctccacgttctgtgccaaggcccacagatcctgctgctgccagagggagcg
ctctctccacggcttgcccgaccgcagagggacaagcagcgccgcgcagactgcctccag
atgatcctgagctggaccggcgccagactggaaggaggccagtacgagaaggccaacgtg
aacgccactgacaaccaccacagcacctgtctgcactacgccgctgctgcaggcatgaag
agctgcgtggagctcctgatccagagtgaagctgatctctttgtggaggacgaggacaag
ctgacgccttgcgaccacgccgagcgacaccaccacaccgacttggcactcagcttggag
tcgcagatggttttctcctgctcctcggctcggcagtcaaatggagacgcacacggtgaa
agccgcctgccgcaatacaaggagccttatgagggactgaagattcaggatctgcgccga
ctgaaggacatgctgattgtagagactgcggacatgctgcaagctccacttttcacagcg
gaagccctacttcgagcacatgattgggacagagaaaagcttctggaagcctggatgtct
gatgctgaaggctgctgccagcgctctggcgtcaccatgcccaccccaccacccaccggc
tacaatgcctgggacaccctgccgtctccccgcactccgaggacgccgcgctcaccccta
acgctcaccctcacctcccccaccgacagctgcctgacaccaggagaggaaggcctggct
acgtgtggcatctgtctctgctccatctcagtctttgaagacccgattgacatgtcctgt
ggtcatgagttttgcagatcctgctgggaggggtttctgaacataaagattcaggaaggt
gatgctcacaatatcttctgccctgcctacgagtgttaccagctggttcctgtacatgtg
atagagagcgtggtttctagagagatggatcagcgctacctgcagtttgatatcaaggcc
ttcgtggaaaacaacccatccatccgctggtgtcccgcggctcgctgtgagcgagcggtg
aggctcaccagaccgggccctggagacagcgacccccacagcttccccctgctgccatcc
ccagctgtcgactgtggcaagggtcacctgttctgctgggaatgcctcggcgaggcccac
gagccatgtgattgtcagatgtggaggaactggctccagaaagtcacagagatgaagcct
gaggaattggcaggagtgagcgaggcgtacgaagatgctgctaactgcctgtggttgttg
accaactccaaaccgtgtgccaactgcaagtcgcccattcagaagaatgagggctgcaac
cacatgcaatgtgccaaatgtaaatatgatttctgctggatatgcctagaggagtggaag
aagcacagctcgtccacgggaggctactatcgttgcactcgctatgaggtcattcagcaa
ctagaagagcagtccaaagagatgactgtggaggcagaaaagaagcacaaaagtttccag
gagctggaccgtttcatgcactactacactcgcttcaagaaccatgaacacagttacaag
ttggagcagaagctgatgaaaacggcaaaagagaagatggagcagctgagcagagccttt
attagccgtgagggcactcctccagacacccgttttatcgaggacggcgtgactgagctg
ctgaagacgcgccgcgtgctgaagtgctcttacccatacggcttctttctgcagcagggc
agcacgcagaaggagatatttgaactcatgcagacggacctggagatggtagtggaggat
ctggctcagaaggtcaatcggccgtacctcaggacgccacggcacaaaataatcagcgca
gcgcggctggtgcagcagaagcggcaggagtttctggcgtctgtggcccgcggcgtcgct
cccaacgactctcctgatccgccccgtaggaattaccctggaggatcatgggagtgggag
taccttggctttgcatcacctgagatgggaagccgtcactctgtactgggagcaggagat
cacagagagagacagtcgcaggattatgctgacatccagtaccggcgcagacacagacca
cgacgcagaggagacatgctgagtctgcacaacctcagaagcagcagcaacacgccggag
accagcaggaggagcgataacgcagatccagcagagaggacagaaggtcgccggagagct
ctgggctccctcgacgaagacgaccccaacatcctcctcgccatccagctgtcgcttcag
gagtcccggcgagagcagggcctggacggcggcgcggagaggaggccggggacggtgggc
gatctggctgacgtcgctttgcactccctcaacatggaggatcctccgggagcccgaggc
ccctccttccccacttccctgctggatcctcctcggccccccaacaggacagactccacc
gcgatgcagccatccgtgctcagctccctccccctgccaccccctcctcccaccctcagc
gccgagctgctggagctgggagacagccttatgaagctggggaacatcaccactccttac
atggacccggagccggcgtgcagccgcggcgcgctcgccgctccttacagcgactgcagc
cacagaccggaccagaacacatcgactccacatgccattctggatcagatcgccgtcaca
gacccccatcatgacagcaaacagccgagctacagcggctcctattcagttgagagtgaa
cacactgcctcctgtgcgctggattgctctcataatcccccccatcctagcgcttacggc
cgggatccggacgaagcagagcgctcctaccagccaggaagctcctacaccgccgaacat
ccctccacctatgctctggacccgccccggtccgacccccagcctcctgttcagctgtgc
ctcccatcgccagagctggagccggagctgctgctttcaccggtaattccaccagggggc
cctttcacccccagcgacccccagagcctgcaggccctggaccccacagccagcgctcag
ctgctggacaacatcatggcctggttcaacaacaacatcaacccccagaacaacccccag
aacctggctctcatcccgtccccgcccaccacggaaacagactcctcccccgacacgcac
gccagcgccgagaaggacgggaccgccgcaccggtctggcagcccctggagggcacgccc
agagcagcagccagcggcggccgtgaggccccgaagaggcccgactctctggagctggaa
aacagagacgtcagagaggagggtgtgagcgcggggtgtgtgtcggacctgtcgctggac
gaagagcacacacacccgcggtcacacggccaagctgacccggcggcggagagtgaagca
gacaccgtgctgcagctggaggggggcgggtcgtcggagaagtgggaggagcaggaacac
ttggtgtga
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