Xiphophorus couchianus (Monterrey platyfish): 114156243
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Entry
114156243 CDS
T05908
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114156243 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114156243 (snupn)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
114156243 (snupn)
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
DNA_ligase_A_M
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
114156243
NCBI-ProteinID:
XP_027892373
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Position
2:30821846..30833223
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AA seq
371 aa
AA seq
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MDDLTAALSSSFAVSKEPNSTAAPHPRLAQYKSKYSVLEQSERRRCFLDLQKTKRLNYVN
HARRLADGDWTGPDSDGEDDMDKQEDREQQQEEEEEGMEVERRKLPKHYANQLMLSEWLV
DVPPDLDSDWLMVVCPVGKRSLIVASKGSTAAYTKSGYCVSRFPSLLPGGNRHNSAMGKD
YTILDCIYSEVDRTYYILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGLSKIAKRNPFR
FVSLQSTDCRAESIQKALAAEYSFGVDGLLFYHQQTHYTPGSTPLVGWLRPYMVTDILGM
EVPVGPLTAKPEYAGQQLQQILEHKQASVEVRPANRSGGYELEYLSTPSTDSKDALNFLN
QKPIKEANMEM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgaccgcagccctctcatccagcttcgctgtgtccaaggagccaaacagc
acagccgcccctcaccctcggctggctcagtacaagagcaagtacagcgttttggagcag
agcgagcggcgacggtgttttcttgacctgcagaaaacgaaacggttaaactatgttaac
cacgcacggcgcttggctgatggggactggacggggccagacagcgacggggaggacgac
atggacaaacaggaggacagggagcagcaacaggaagaggaagaggaggggatggaggta
gagaggaggaagctgcccaagcattatgcaaaccagctcatgctgtcagagtggctggtg
gacgtcccaccagatctggacagcgactggctgatggtggtctgtcctgtggggaaaaga
tctctaattgttgcctccaagggttccactgctgcgtacactaaaagcggctattgtgtg
agccgtttcccttccctgctccccggtgggaacagacacaactctgccatgggaaaagac
tacaccatcttggactgcatttacagtgaggtggacagaacgtactacatcctggatgtc
atgtgttggagaggacacccggtctacgactgcccaactgagtttcgcttctactggctc
cagtctaaggtccaggagacagacggcctgtcgaagatcgccaaacgcaaccctttccgg
ttcgtgagtctccaaagcaccgactgcagagccgagtccattcagaaagcactggcagcc
gagtacagcttcggtgtggatggacttctcttctaccaccagcagacccactacaccccc
ggcagcacccctctggttggctggcttcgcccctacatggtgacagacatcctgggtatg
gaggttcccgtaggacccctcaccgccaagccagagtacgccggccagcagctgcagcag
atcctggaacacaaacaagcgtccgtcgaggtccgccccgccaacagaagcggcggctac
gagctggagtacctgtccactccgagcacggacagcaaggacgccttgaacttcctgaat
cagaagccaataaaggaggcaaacatggaaatgtga
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