Xiphophorus couchianus (Monterrey platyfish): 114156251
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Entry
114156251 CDS
T05908
Symbol
rprd1a
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114156251 (rprd1a)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114156251 (rprd1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
Takusan
CTK3
Motif
Other DBs
NCBI-GeneID:
114156251
NCBI-ProteinID:
XP_027892387
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All DBs
Position
13:11471952..11478363
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AA seq
294 aa
AA seq
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MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSKTIVTVWFTELKKAQVSRKLTFL
YLANDVIQNSKRKGPEFTQDFAPVIVEAFKHVNREGEEGCKKQLGRVLSIWQERAVYENN
LLEQLSEVLYGEKKPKKRSYEEIHPDDEGFASRSSPADPPQTADLIRALQELENAASSDS
VLRQRIFSLPAEVQDTSLLHRITDKESGERLSRMVEEACMLLADYSGRLAAEIDDRRQLT
RTLTTFLQSQKDGLTQNEQKLEEYKRKLTMVSQVRKELRSRLSNLSEGHRNSSK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctttctccgaggcggcattagagaaaaaactatccgagcttagcaactctcag
caaagtgtgcaaacgctgtcgctgtggctcatccaccacagaaaacactcgaagactatt
gtcacggtgtggttcaccgaactgaagaaagctcaggtatcgcgcaagctgaccttcctt
tacttggccaacgacgtcattcagaacagcaagagaaaaggaccggagttcacccaggac
tttgcgccggtcatcgttgaagcattcaaacatgtcaacagggaaggcgaggagggctgc
aagaaacagctaggtcgggttttatccatctggcaggagagagcggtgtatgagaacaac
ctgctggagcagctctcagaggtcctctatggagaaaagaaacctaagaaaagatcttat
gaggagatccaccctgatgatgagggcttcgcctcccgtagctccccagctgatcctcca
cagacagcagatttaattcgagccctgcaggaactcgaaaacgccgcctccagcgactcg
gtgctgcggcagcgcatcttctctcttcctgccgaggtccaggacacgtccctccttcac
aggatcacagacaaagagtcgggcgagcggctctcccggatggtcgaggaagcctgcatg
cttttagccgactacagcggtcgcttggccgcggagattgacgacaggaggcagctcaca
cgtacgctaacgaccttcctgcagagccagaaggacggcttgacccagaacgagcagaaa
ctcgaagaatacaagaggaaactgacgatggtgtcgcaggtccggaaagaactgcggtcg
cgcctcagtaacctttcagaaggacatcgcaactcttccaaatga
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