Xiphophorus couchianus (Monterrey platyfish): 114156257
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Entry
114156257 CDS
T05908
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114156257 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114156257 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114156257 (vps28)
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
114156257 (vps28)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114156257 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
114156257 (vps28)
Exosomal proteins of colorectal cancer cells
114156257 (vps28)
Exosomal proteins of bladder cancer cells
114156257 (vps28)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
114156257
NCBI-ProteinID:
XP_027892397
LinkDB
All DBs
Position
13:complement(12342063..12345648)
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AA seq
223 aa
AA seq
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MFHGIAGSGGVGSAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVSPSEYTASCSRLLVQYKAAFKQVQGSDVGSIDEFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgggatagcaggcagtggaggagtcgggtcagctccagctaacaaacctgag
ttgtatgaggaggtcaaactgtataaaaacgcacgggaacgagaaaagtatgacaacatg
gccgagttgtttgctgttgtaaagaccttgcaggcattagagaaggcttacatcaaagac
tgcgtatcccccagcgagtacacggcttcctgctccagactcttggttcagtataaagct
gctttcaaacaggtgcaaggctctgatgtgggctccatcgatgaattctgcaggaagtac
agacttgactgcccacttgcaatggagaggattaaggaagatcgaccaattaccatcaaa
gacgataagggcaacctgaaccgttgcatcgcagatatagtttctctcttcatcactgtt
atggacaagctgaggctggagatcagagccatggatgagatccaaccagatctgagagag
ctgatggaaaccatgaacaggatgagcaacatgcctccagactctgaggcaaaggacaaa
gtgaacctctggttgaccacccttagcggcatgtctgcctcagatgagctggatgataac
caggtccgccagatgctctttgatctggaatcagcctacaacgccttcaaccgcttcctc
cactcttcctaa
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