Xiphophorus couchianus (Monterrey platyfish): 114156364
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Entry
114156364 CDS
T05908
Name
(RefSeq) chondroitin sulfate proteoglycan 5-like isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114156364
Proteoglycans [BR:
xco00535
]
Cell surface proteoglycans
Others
114156364
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
OppC_N
Motif
Other DBs
NCBI-GeneID:
114156364
NCBI-ProteinID:
XP_027892545
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Position
13:10127133..10139251
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AA seq
464 aa
AA seq
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MARGDSRLETWQVLLTISMFIIPLCAHNGRHSLARRHPHHNHSSVHKEALDTRMVLSDDS
AEREHLIGAGIGARLPLSSTRHHHSHKRHYLDFVEEDQHGEEFTAGGAGPDHPGNPLSDD
VIMVAFHSPAPDVVPADVTLDWAKTPKAQKQRGGEPNKYSLTEYYDYLSSDNDVSAVDTT
PEPEPTPSPPPDMEDENPLLAGSPVIRKNSRPNTSGGSSLPAPPMQEPDNNNGMGVGGAV
GADGCRLGFVLSGPGVCVSQCDIEQNFCFNGGVCTVVAGMGAFCRCNIQDYIWNKGLRCE
WAVTEFQVLCVVVAVACFVFLLLFMIIVFFAKSLYRLKNENMRLRKRSKYRPQSSEPQTD
GLSVSTTADGSQPNVRKLCDTPPPAPQAHTHNLAYYDNIICQDEPQKKENQAKSPQPKEE
GSMNILNSHSPKHENNRPASVVHGHTPNNTEENTEVNMLQNNLV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtggagacagtcgactggagacctggcaggtgctgctgaccatctccatgttc
atcatccctctgtgtgcacataacgggcggcattcgctggccagacgtcatcctcaccac
aaccactcatccgtccacaaagaggccttggacaccaggatggttctcagtgatgactca
gcagagagagagcacctgatcggagcaggaatcggtgcccgactcccactcagctccacc
aggcatcaccactctcacaaacgccactacttggattttgtagaggaggaccaacacggg
gaggagtttacagccggaggggcggggccagaccatcccgggaacccattatctgatgac
gttatcatggtggcgtttcacagtccagcgccagatgttgtgcccgccgacgtcactctg
gattgggcaaaaacccccaaagctcaaaagcagagaggtggagaacctaataaatattcc
ctgactgaatactacgactacctgtcttctgacaacgacgtctcagcagtagacacgacc
ccagaacccgaacccaccccttcacctccacctgacatggaggatgagaatccgctcctg
gcaggttctccggtgatccgcaaaaactcaaggccaaacaccagtggtgggtcatctttg
ccagctcctcctatgcaggaaccagacaacaacaacggaatgggtgtaggtggggctgtg
ggtgcagatggctgcaggctgggctttgtgctgtccggaccaggagtttgtgtttctcag
tgcgacattgaacaaaacttttgcttcaacggaggggtgtgcaccgtggtggcaggaatg
ggtgccttctgcaggtgtaacatacaggactacatctggaataaaggcctgcgctgtgaa
tgggccgtcacagagttccaagtgctgtgcgttgtggtggccgtggcctgtttcgtcttc
ctcctgctcttcatgatcatcgtgttcttcgccaagagcctataccgcctcaaaaacgag
aacatgcgccttcgcaaacgcagtaagtaccgcccccagagcagcgagccacagacggac
ggcctctcggtttcgacaacagctgacgggtcgcagccaaatgtaaggaaactgtgtgac
acccctccgcctgccccccaagctcatactcacaacctggcgtactatgacaacattatc
tgtcaggatgagccgcagaagaaggagaaccaagccaaatccccccagcctaaagaggag
gggtctatgaacatcctgaactcccactcccccaagcatgagaacaatcgccctgcctct
gttgtccacggccatacccccaacaacacggaggaaaacacagaggtaaacatgctccag
aacaacctggtgtaa
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