Xiphophorus couchianus (Monterrey platyfish): 114156388
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Entry
114156388 CDS
T05908
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114156388
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
114156388
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Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
114156388
NCBI-ProteinID:
XP_027892589
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Position
13:16356304..16369641
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AA seq
680 aa
AA seq
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MEHSPSMNSTVVDGDELEDHRPLLPPRIVAPPQAYSPQCGIHHTVQTPIDHSAWLDRTQA
LATTPLYNGHLYVTATPRSNRRREKTKGKEKKCEKRLQNPGVKERNHQSKTKTLSANTLQ
ETVTSFTDVPMSPRGSPFKGHSRSNLDLRDVDGRGYRKAGNVSLEMHDRQSLPEIIITSK
DDNLQQQQHKHKALQYHQHPGEAEGPLPGAKRFTRSPSPSPQHSPKRKEDANKDSYSRTH
NIGWRLVRRRALFLRRQRLNDCALAVGLFGVVMMVMETEMSWSIYSKSSIYSLCFKSVIS
FSTLILFGLIVAYHCCEVQLYVHDIGAEDWRIAMTTERFALIVLELFIVAIHPYPVGILA
YFQKTKVRTTLSETELEIMLALPMFLRLYLLGRAMMLHSRLFTDTASRSIGALNKIHFNT
RFVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTFLS
IGYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHISKR
IKIAAANVLRETWLIYKHTKLSRERDHTRVRMHQRKLLLAIHQLRRVKMEKRILADQGNT
LVDLCKMQSLMYDVLAEVQGCRGELNSHISSLVKNVEELREGFRCLMPLLSSTLSTQNSS
IRHLLREREEKSECVSGAEG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagcattccccgtcaatgaactcaacggtggtggatggagacgagctggaggaccac
aggcccctcctgccaccaaggattgttgccccacctcaggcctactcgccccaatgtggg
atacaccacacagtccagacacccatcgaccactccgcatggctggacagaacccaggcc
ctggctaccacgcctttgtacaacggccacctctacgtcactgcgacgcctcgatccaac
aggaggagagagaaaaccaagggcaaagagaaaaaatgcgagaaacggctgcaaaatcca
ggtgtgaaggagcgcaaccaccagagcaaaactaaaactctgagcgcaaacacactccag
gagacggttacgtccttcaccgatgtgcccatgtcccccagaggatcacccttcaagggc
cacagcaggtccaacctggatctcagggatgttgacggtcgagggtaccgcaaggcaggc
aacgtttctctggagatgcacgaccgccagagcctcccagagatcatcatcaccagcaag
gacgacaacctccagcagcagcagcacaaacacaaggcgctgcagtatcaccagcacccg
ggggaggcagaggggccgctgccaggggccaagcgcttcaccaggagccccagcccaagt
cctcagcacagccccaaacgcaaggaagacgccaacaaggactcgtactcgcggacgcac
aacatcggctggcggctggtccgtaggagggccctgttcctgaggaggcagcggctgaat
gactgcgccctggcggtggggctgttcggggtagtcatgatggtgatggagacggagatg
tcctggagcatctacagcaagagctccatctactcgctgtgtttcaagtcagtcatcagt
ttttctacgctcatcttgtttggcctcatcgtggcgtaccactgctgtgaggtgcagctc
tacgttcatgacattggtgcagaggactggagaatagccatgaccaccgaacgcttcgcc
ctgatcgtcttggagctcttcatagtggccatccatccttatccggtgggaatactggca
tacttccagaagaccaaagtccgcacaaccctctctgagaccgagctggagatcatgctg
gctttgcccatgtttctgagactgtacctgctgggtcgggccatgatgctgcacagccgc
ctcttcacagacacggcctcccgaagcatcggagccctgaacaagatccacttcaacacc
cgcttcgtgggaaaaacgttgatgactacctatcctggtactgtgctgatgattttcagt
gtttctctgtggattgtggcggcgtggggcctacatgtgtgcgagaggcaccacaattac
agagaccttagcagcaactacatggaagccctgtggatggtctccgtcaccttcctgtcc
atcggttacggagacgtggtccctcacacgtactgtggccgcagcatctgcctcctcact
gggatcatgggggcgggatgcacggtcctggtggtggcggtggtggccaggaagctggag
ttgacccgagctgagaagcacgtccacaacttcatgatggactctcacatctccaagagg
ataaaaattgcagcagcaaatgtgctgagagagacttggctcatctacaagcacactaag
ctgtcaagagaaagagaccacaccagagtccgcatgcaccagaggaagctgctgctggcc
atccaccagttgcggagagtgaagatggagaagaggattcttgcagatcaggggaacacg
ctcgttgacctctgcaagatgcagagcctgatgtacgacgtgctggcggaggtgcagggc
tgcaggggggagctgaactcgcacatcagcagcctggtgaagaacgtggaggagctgagg
gagggcttccggtgcctgatgccgctgctgtccagcacgctgtccacacagaactcctcc
atccgccacctgctgagagagagggaggagaagagcgagtgtgtgagcggagcagagggg
tag
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