Xiphophorus couchianus (Monterrey platyfish): 114156407
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Entry
114156407 CDS
T05908
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
114156407
NCBI-ProteinID:
XP_027892621
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Position
13:20524618..20688146
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AA seq
1174 aa
AA seq
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MKMAPTSWLWLWRLPLLLTILKLRLCFLSVSASTTSFPKDLESLHVVSSEQSYQYPGFQG
LLQDNDTLRLGLDFQRMLRINHILYIAARDHVFAVNLTTASEEFVPQLKLTWRSKDVSKC
TVRGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLEQVGEEVVGQARCPF
ESIQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAI
DYGNYVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVP
GDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQSNSIPGSAVCAFYMDDIEKVFNGKFKEQ
RTSDSSWTPVPDEQVPRPRPGTCAGDGPASDYKSSVQFPDEMLTFIKSYPLMDEAVPSVN
DRPCFTRTSSRSKLTQIVVDVSAGPLKDRTVMFLGSDDGRVLKVLASTHPNDSFGSKLLE
DIDVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFTSCVIRVPLSRCTQHGACKNACLA
SRDPYCIWLRTGTCANMAPGFKAGFEQDIEGDHSFYPDNCHTDVLATTRNQESAADSAYG
VRRPPELDQRASANVHYTLLIACVFVAFFLGAILSGFLVSCYCSRSAAHRARRLGKDPEA
SLPHALSLRSLAKLNGLLDGQPKDDKLDVSTPKMYSSFIPNGRAEPHLHTPGHQGLQLGD
PDLNLSQSLSQGDGELSGLPTPDSTPELPFRNMKGLRHHQYEKNQNCNNTKDNNPKSGPS
CSKSNQGFMAVVGNSLSQQVFPFSHHNGGGLSNGAAHGAGASSTSLHLLEERKIPNDERA
ATAATASAGGGGGGAPHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTS
SSSLFPGPSSSGGGHQSGHHHHHHHQNQHNHTRTHHYNHSHHHSNHHNNNSSSSHHHQQQ
QIPETEPTSYYSTSTLPRDGVPKRLDSAPQNSTSSSATSSSSSSSSNNPTSSTSIPSSSS
SSSSTPLQQQVIPERPGGSDVPVARHQSQRHSLIKMGAAGGAVPRHHSFNQRGTHAHFLA
RMNTNNNSSSSNNNRPPGPAAAANTNTSNNNESQRVSVASACLTRQHSYSEGPHAQRAAI
VRRTVSLKPQIPPKPLFLPNTATSAVTEAGKYNY
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccccgaccagctggctgtggctgtggcggctgccgttgctgctaacgatc
ctcaagcttcgtttgtgttttctgtctgtgtcggcttcaaccacatccttccccaaagac
ctggagtcactccatgttgtcagctcggagcagtcgtaccagtatccaggctttcagggt
ctgctgcaggacaacgacacgctgcgcctgggtctggactttcagagaatgttgaggatc
aatcacattctttacattgcagcaagggatcatgtgtttgctgtgaacctcactacggca
tcagaggagtttgttccacagctgaagctgacgtggagatccaaagacgtcagcaagtgt
acagtcagggggaagaacagcgatgagtgctacaactacgtcaaagttctggtgcctcga
aacgatgagactttgtttgcttgtggtactaatgccttcaacccaacctgccggaactac
aagatgacctccttggagcaggttggggaggaagtggtgggtcaggctcgctgtccgttt
gagtccattcagtccaatgttggattgtttgctgggggagatttctattcggccaccatg
acggactttctagcaagcgatgctgttatctacagaagcctgggcgagggccggccagtt
ctcaggaccgtcaagtatgactccaaatggctccgagagcctcatttcctgcatgccatc
gactatggtaactatgtctactttttcctgagtgagatcgcagtggagtatacagccttg
ggcaaggttgtgttttctcgagtcgcgcgtgtctgtaagaatgataacggaggatcaccc
agagttctggaaagatactggacttccttcctgaaggcccggttgaactgttcggtccca
ggagactccttcttctacttcgatgtccttcagtctctcaccaacgtgctgcagatcaac
cagaggccagcagtcgttggagtgtttaccactcagtccaacagcataccaggctcagca
gtttgtgccttttacatggacgacattgagaaagtcttcaacgggaagttcaaagagcag
agaaccagtgattcatcctggactccagtgccagacgaacaagttcccagaccaagaccg
ggtacttgtgcaggcgacggtccggcctcagactacaaatcttcggttcagttcccagat
gagatgttgactttcatcaaatcttatcctctgatggatgaggcagttccctctgtcaac
gaccggccctgcttcacacggacatcgagcaggtccaagttgacccagattgtggtggat
gtttcagccggtccccttaaggacagaacagtcatgttcctgggctcagacgatggccgt
gtcctgaaagttctggctagcacacatcccaatgacagctttggatccaaactcctggag
gacatcgatgtttataacccctccaagtgcaatgttcagggtcaggaggacaggagggtt
ctgggactggagttggacaaggaccatcatgcactgtttgttgcttttaccagctgtgta
atcagagtaccactcagtcgctgcacccaacatggagcctgtaaaaacgcctgcctggcc
tcccgtgatccttactgcatctggcttcgcaccgggacatgcgccaacatggcaccaggc
ttcaaggccgggttcgaacaggatatagagggcgaccactcgttttaccccgacaactgt
cacactgatgtgttggccacaacacgaaaccaggaatcagcagctgactctgcctacggt
gttcgtcgtcctcctgagctggatcagcgtgccagcgccaacgtccactacaccctgctg
atcgcctgcgtgttcgtggcattctttctgggagccatcctatcgggtttcctggtgtct
tgttactgcagccgcagcgcagctcaccgagcccgcaggctagggaaggaccccgaagca
tcactgccgcacgctctgtcgctacgatcgctcgccaagctgaacgggcttctggatggg
cagccgaaggatgacaaactggatgtgtccacgccaaaaatgtacagctccttcatccct
aacgggcgggccgagccgcacctccacacccctggacatcagggcctgcagctgggagac
cctgacctcaacctctcacagtctctttctcagggtgacggagaactctctggcttgcca
acgcctgactccaccccagaactccctttcaggaacatgaagggtttgcgacatcatcag
tatgagaagaaccaaaactgcaacaacaccaaggataacaaccccaagtcaggtcccagc
tgctccaaatccaaccagggcttcatggctgtggttgggaattctttgagccagcaagtt
tttcccttttctcaccacaacggtggcggtttgagcaacggggcagcacatggggcaggc
gcctcgtcaacttcactgcacctccttgaggagaggaaaattcccaatgatgagcgagct
gccaccgccgccacagcatctgcaggaggaggagggggtggagctccacatcaccaccac
tcccagcagtccctaccccagacagtggtggacgtgtctgcactggatgagctgctcaaa
cacatccatgaggtcagcgcatcaggaactggtggaatcaaggtcctcacgtctacctcg
tcgtcctcgctgttccctggaccgtcctcttcaggaggaggacatcaaagtggtcaccat
caccaccatcatcatcaaaaccaacacaaccacactcgaacacatcactacaaccacagc
catcatcacagcaaccatcacaacaacaacagcagcagcagccaccatcaccaacagcag
cagattccggagacagaaccaacttcctattacagcacctccacactgccgagggatggc
gtccccaaacgcttggattcagctcctcaaaactccacctcatcctctgccacgtcttcg
tcttcatcctcctcttcaaacaaccccacctcctccacctccatcccttcttcgtcctct
tcctcttcctccactccgctccaacagcaggtgatcccggagcggcctggagggagcgat
gtccccgtagcgcgtcaccagtcccagcgccactccctcatcaagatgggtgcagcaggt
ggcgctgtgccccgccatcacagcttcaaccaacgggggacacacgcacactttctggcc
agaatgaatacaaacaacaacagcagtagcagcaacaacaaccgacccccaggtccagcc
gcggcggccaatacaaacaccagcaacaacaatgagagtcaacgggtatctgtcgccagt
gcctgtcttacacggcaacacagttacagtgaagggccgcatgcgcagcgggcggcaata
gtccgaagaacggtgtccctgaagccacagatcccaccaaaaccgctttttctgccaaat
acagcaacgtctgcagtaacggaggcaggaaagtacaactactaa
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