Xiphophorus couchianus (Monterrey platyfish): 114156430
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Entry
114156430 CDS
T05908
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114156430 (pus7)
Enzymes [BR:
xco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
114156430 (pus7)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
114156430 (pus7)
Prokaryotic type
114156430 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
114156430
NCBI-ProteinID:
XP_027892659
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All DBs
Position
2:complement(28374951..28386224)
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AA seq
713 aa
AA seq
DB search
MCFRGLSHTHVWETQFFLTTFRPPLNIDTNSVKLWVLTTFLRLPVRWKRRRVFRIHRHSL
LQLCKHSTLMAESEPVSDAAPVGEKRTCLRHGDEETPAKKPKVDGENGNAPNPDGGGGGG
EEEEEEQPEGQASDGEEDGESFADMMKHGLTETDVGILKYVSDHKGFSGILKERYSDFVV
HEINKQGKMVHLDDLSIPADSEEGAEPEQQPTECDVLTEEQRQQLGELQLFKNKERNVSI
EVKDDTKEKRTLVHKAIKTQFPGLETKTEEKEGHKFIVAYHAAGKKALAEVKTAAAPRKH
FWPKNRGSYCHFALYKENKDTMDAINVLSKFLRLRPNMFSYMGTKDKRAITVQEIAVLKI
TAERLAHLNKCLMNLKLGNFCYKNHPLKLGELQGNHFTVVIRNISGTDEQVQQAMGSLKQ
TGFINYYGMQRFGTTAVPTQQVGRAILRNDWNQVVDLILKPRPGAEKEYLVRCREEWAKT
QDPEAALKKLPNKRCVEGQLLRGLSMYGKKNIVTAFGLIPRNNRLMYVHSYQSVVWNAMA
SRRIEAFGLKAVEGDLVLRGTTAHVLSAEEAESHSIHDIVMPLPGYDVIYPSHHIGEGYR
ELLSADGLDLDNMRHKVKDYSLAGAYRRIIVRPTDVSWEVIHYDDPRISLVHSDFEKLEN
KPAPVFNQDGQYRALRMEFSLPSSTYATMAIREVLKLDTSIKKQTQLNTVWFN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttccggggtctttcacacacgcacgtgtgggagacgcagtttttcttgaccact
ttccgtcctccgttgaacatcgacacgaacagcgtcaagctttgggttcttacgacgttt
ctgcgactgcctgttcggtggaagagaagaagagttttccggattcacagacattccctg
ctccagctttgtaagcactcgactttgatggccgagtcagagcctgtgtctgacgccgcc
ccggtcggagagaagagaacctgtctgcggcacggggacgaagagacgccagccaaaaag
ccaaaagttgacggtgaaaacgggaacgctcctaacccagatggcggtggcggcggtggt
gaggaggaggaggaggagcagccggaaggacaggcgagtgatggagaggaggacggcgag
agctttgctgacatgatgaagcacggcctgactgagacggatgtcggcatcctgaagtac
gtcagtgaccacaaagggttctctggaatcctcaaggaaaggtattctgattttgtcgtg
cacgaaatcaacaaacaaggaaagatggtgcatttagatgatctctccatcccagcagac
agtgaggaaggagcggaacccgagcaacaaccgactgagtgcgacgtgctgacggaggag
cagagacagcagctcggtgagctgcagctcttcaagaacaaagaaagaaacgtctccatc
gaggtaaaagacgatacgaaggagaagagaacgctcgtccacaaagccatcaagactcag
ttccctggtctggaaacaaagaccgaagagaaagaaggtcacaagttcatagtggcctac
catgctgcagggaagaaggcgttagcagaagtcaaaacagctgcagctccaaggaagcac
ttttggcccaaaaaccgcggcagttattgccactttgctctttacaaggagaacaaagac
accatggatgccatcaatgtgctctcaaagttcctcaggcttagacccaacatgttctcc
tacatgggcaccaaggacaagagggccatcacagttcaggaaattgcagttctcaagatc
accgcagagaggttggctcacctcaacaagtgcctcatgaacctgaagctcggcaacttc
tgctacaaaaaccaccctctgaagctcggggagctgcagggaaaccacttcactgtggtc
atcaggaacatctcaggaacggacgagcaggtccagcaggccatggggtccctcaagcag
accggcttcatcaactactacgggatgcagcgcttcggcaccaccgccgtgcccacgcag
caagtaggcagggccatcctgagaaacgactggaaccaagtggtggatctgattctcaaa
cctcgacctggagcagagaaagaatatctggttcgctgcagggaggagtgggcgaagact
caggacccagaggctgcgctgaaaaagctgccaaacaagcgctgcgtggagggacagctg
ctccggggcctgtccatgtacggcaagaaaaacatcgtcaccgccttcggattgatcccc
cggaacaaccggctgatgtacgttcacagctaccagagcgtggtgtggaacgccatggcg
agtcgcaggatcgaagccttcggcctgaaggcggtggagggcgatctggttctcagagga
accacagcacacgtcctgagtgccgaggaggccgagagccactccatccatgacatcgtg
atgccgcttcctgggtatgatgtcatttacccctcccaccacatcggtgagggatacagg
gagctgctctctgctgacggcctggacctggacaacatgaggcacaaagtgaaggactac
tccctggccggagcctacaggcgcatcatcgtcagacccactgatgtcagctgggaggtg
attcactatgacgacccccggatctctctggtgcacagcgattttgagaagctggagaat
aaacctgctcctgtcttcaaccaagacgggcagtaccgggctctgcggatggagttctcc
ctgccttcctcaacctatgctaccatggcgatcagagaggtcctcaagttggacaccagc
atcaagaaacagacgcagctcaacaccgtttggtttaactga
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