Xiphophorus couchianus (Monterrey platyfish): 114156446
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Entry
114156446 CDS
T05908
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04814
Motor proteins
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114156446 (dync1i1)
09142 Cell motility
04814 Motor proteins
114156446 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114156446 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114156446 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114156446 (dync1i1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
114156446 (dync1i1)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
114156446 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
114156446
NCBI-ProteinID:
XP_027892692
LinkDB
All DBs
Position
13:complement(9199055..9258935)
Genome browser
AA seq
649 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEKSDSQQKTEVTPEDSDLDRKRRET
EALLQSIGISPEPPLVPTPVSPSKSVSTPSETGSQDSAEGGAAGRFRSGFSKNKPQAQSS
RTLQWDTDPSVLQLQADSVLGRKMQRLGASKIIQVDFLPKEVVSYSKETQTPVNTLLSEV
EEEEEDEDMLEAKPGPEAELRDEDDNKESKDGCFPVLRELTEEERQQILHSSEFQSFFDC
SIRVMERALAEDSDILFDYSGRDLEDKEGDLGSGSSLSFSRLFYDEHWSKHRVITCLDWS
PQYPELLVASYNNNEDAPHEPDGVALVWNTKFKKATPEYIFHCQSPVVAVGFAKFHPNLV
VGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMC
SWSLDMLSQPQETMELVYNKSKPVAVTGMAFPTGDVNNYVVGSEEGTVYTASRHGSKAGI
CEMFEGHQGPVTGISCHSAVGTVDFSHLFITSSFDWTVKLWSTKHNKPLYSFEDNADYVY
DVMWSPVHPAMFAAVDGMGRLDLWNLNNDTEVPTASVTIEGASALNRVRWSSGGKEVAVG
DSEGRVWIYDTGELSVAHPEDWARFARTLMEIRANRADGEEEGPMELAS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacctgaaggcagagctggagcgcaaaaagcagcgcctcgcccag
atcagggaggagaagaaaagaaaggaggaggagaggaagaagaaagagaagtcagacagc
cagcagaaaacagaggtgacgccagaagattcagacttggaccgcaagcgcagggagacc
gaggccctgctacagagtattggcatctcccccgaacctccgctagttcctacacctgtg
tccccctctaaatcggtgagcacgcccagtgagacgggaagccaagattcagctgaggga
ggggcagcaggcagatttaggtcaggtttctctaaaaacaagccccaagcacagagctca
aggacactgcaatgggacacagacccctctgtgctgcagctgcaagctgattccgtactt
gggcgcaagatgcagaggcttggggcctctaaaatcatccaggttgacttccttcccaaa
gaggtggtctcttacagcaaggagacacaaacacctgtcaacaccctcctctctgaagtt
gaagaggaagaggaagatgaagacatgctagaggcaaagccaggcccggaggccgagctg
cgggatgaagacgacaacaaggagagcaaagatggttgttttcctgttctgcgggaactg
acagaagaggaaaggcaacagatcctgcactcgtcagagtttcaaagttttttcgactgt
agcatccgggtgatggagagagcgctcgctgaggacagtgacatcttattcgactacagc
ggccgtgaccttgaggacaaagagggagacttgggaagcggctctagtttgtccttcagc
agactattctatgatgaacactggtccaaacatcgtgttattacctgtcttgactggtcc
cctcagtatcctgaattactggttgcatcctacaataacaatgaagatgctccccacgaa
ccagatggtgttgccctggtgtggaacaccaaatttaagaaggctacaccagagtacatc
tttcactgtcagtctccagtcgtagctgttggttttgctaagtttcatccgaacttggtg
gtaggaggaacatattcaggacagattgttctgtgggacaaccggagtcaccgccggacc
ccagtgcagaggacccccctctctgctgcagcacacactcacccggtatattgcgtgaac
gtggtcggcacccagaatgccaacaacctgatcactgtatctacagatgggaggatgtgt
tcgtggagtctcgacatgctctctcagcctcaggagaccatggaacttgtgtacaacaaa
tccaaacctgtggcggtgacaggtatggctttccccacgggggatgtcaacaactatgtg
gtggggagcgaggaaggcaccgtgtatactgcatccagacatggcagtaaagcgggcatc
tgtgaaatgttcgagggccaccaggggccggttacgggaatcagctgtcacagtgcagta
ggcactgtagacttctcccacctctttattacatcttccttcgactggaccgtcaaactc
tggagcaccaagcacaacaaaccgctgtactcttttgaggacaatgccgactatgtgtat
gacgtcatgtggtcgcccgtgcatcctgccatgttcgccgccgtggacggcatgggccgc
ctggacctgtggaacctcaacaacgacacggaggtgccaactgccagtgtgaccattgag
ggagcttcggctctgaacagggttcgctggtcgtcgggagggaaagaggtggccgtgggc
gactcagagggcagagtttggatctacgacacaggagagctttccgtggcccaccctgag
gactgggcgcgctttgctcgcacactcatggagatccgcgctaaccgggcggacggtgaa
gaggagggccctatggagctggcttcatag
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