KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156490
Entry
114156490         CDS       T05908                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xco03016]
    114156490 (dus3l)
Enzymes [BR:xco01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     114156490 (dus3l)
Transfer RNA biogenesis [BR:xco03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    114156490 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf-CCCH_2 zf-CCCH_PAN3 zf_CCCH_4
Other DBs
NCBI-GeneID: 114156490
NCBI-ProteinID: XP_027892756
LinkDB
Position
13:complement(15288927..15301169)
AA seq 657 aa
MHIGYHKSKNRERVFDQMMEASAEDATETATQVAVKGEAAIKQEFITTKDAFHGFLDSEW
QGSKGEKATENETLQEKKDPLVDEPESKKPKLDPEDVKKTEKQDKKRFRGRNKSRPHIKP
TTYEEKRLCLSVIQKNGECKFGEKCIFYHDVAEYLANKPADIGERCYLYDTFGKCEYGLA
CRFAKAHTTADFKTMEKAELVEAYEGRTLVKNSLSKDLQYRLRKRSVIFKKSEEYLKTLS
NNKDKKEQQENGDVCTAEVSAEPKEEIQHVSTEEPLPTCPDIQPPVKTVGPLTDADVIKL
RPCEKKKVDFQDKLYLAPLTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGHQSEWALL
KRHESEDLFGVQVEGCFPDTMTRCAELISNYADVNFVDINSGCPIDLVYKKGGGCGLMTR
TRKFEQIIKGMNYVLDVPLTVKIRTGVQEKSSIAHKLIGEMKNWGVSMVTLHGRSREQRY
TKLADWDYISTCAKLANPVPLFGNGDILSYEDAVKAKETGVSGVMIARGALIKPWIFTEI
KESRHWDVSSSERLDILRDFTNFGLEHWGSDTRGVEKTRNFLLEWLSFMCRYIPVGLLER
VPQKINERPPYYMGRNFLESLMASQNVDDWIRISEMLLGPVPKNFNFLPKHKANSYK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgcacatcggttaccacaagagtaagaacagggagcgagtctttgaccaaatgatggag
gcatcagcggaagatgccacggaaacggcaacacaagtagctgtgaaaggtgaagctgct
atcaaacaagaatttatcaccaccaaagatgcatttcatggatttctggattcagaatgg
cagggctccaaaggagaaaaagccactgaaaatgagacactacaagagaaaaaggatccc
ttagtggacgaacctgaaagtaaaaaacccaaactggaccctgaagatgtgaagaaaaca
gaaaaacaggataagaaaagatttcggggtcggaataagtcgaggccacacataaaaccc
accacttatgaagaaaagcgactgtgtttgtcagtcattcagaaaaacggtgaatgtaag
tttggggagaaatgcatcttttaccatgatgttgcagagtacttggccaataaacctgcc
gacatcggggaacgttgttacctctacgacacgtttggaaagtgtgaatatgggctcgcc
tgccgcttcgccaaggcacacactacagctgattttaaaaccatggagaaggcagagctg
gtcgaagcttacgaaggaaggactttggtgaagaacagcctgagtaaagatctgcaatat
cgcctgaggaaacgttctgtcatcttcaaaaagtcagaggaatacctgaaaacgctttca
aacaacaaagataaaaaggaacagcaggaaaatggtgatgtttgtacagcagaggtatct
gcagagccaaaagaagaaattcagcatgtttctacagaagaaccgctgcccacctgtcca
gatatccagccgccagtgaagactgtaggcccactaactgatgcagacgttatcaaactg
cggccctgtgaaaagaaaaaggtggacttccaagacaagctctatctcgctcctctaaca
acttgtgggaacttgcctttccgtcgtgtgtgcaagcgctttggcgcagacatcacttgc
ggggagatggccatgtgcacgaatctgctgcaggggcatcagtcagagtgggccctcctg
aagaggcatgagagcgaagacctgtttggtgttcaggttgaaggctgtttccctgacacc
atgacacggtgtgcggagcttatcagcaactacgccgacgttaattttgtggatatcaac
tctggctgccccattgatctggtttacaagaagggtggaggatgtggcttgatgaccaga
accagaaaatttgaacagattatcaaaggaatgaattatgtcttagatgtccctttaacc
gtcaagatccgcactggtgttcaggagaagtccagcatcgcacacaaactcatcggagaa
atgaagaactggggcgtctccatggttacactgcatggccgatccagggagcagcgctac
acaaagttagctgattgggactacatcagcacatgtgccaaactggccaaccctgttcca
ctctttggtaatggagacattctgtcttatgaagacgcagtgaaagcgaaggagaccggt
gtttctggcgtcatgattgcaaggggtgccctaatcaagccttggatcttcacggagata
aaggagagccgacactgggacgtctcgtccagcgagcggctggacatcctcagggacttc
accaacttcgggctggagcactggggctccgacactcggggcgttgaaaagacccgaaac
ttcctgctggagtggctgtccttcatgtgcagatatattccggttggcttgttggaacga
gttcctcaaaagatcaatgagcggccgccatattacatgggcaggaacttcttggagtcc
ctgatggccagtcaaaatgttgacgactggatcaggatcagtgaaatgctcctcggacct
gtcccgaagaacttcaactttttacctaaacacaaagcaaattcctataaatga

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