Xiphophorus couchianus (Monterrey platyfish): 114156511
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Entry
114156511 CDS
T05908
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114156511
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
C1-set
Motif
Other DBs
NCBI-GeneID:
114156511
NCBI-ProteinID:
XP_027892796
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Position
13:23466210..23473119
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AA seq
442 aa
AA seq
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MTDFSTIYKLSIIAFIGFIQGCSCTCPVMECWFVQEKPGRGGGLTGATTQEKSLLHIRTD
KQSEAAGSQSDATDIDPSRVYAVTDPSANLCHASLNPPRGSIQKPQCEINPFLPQPSSLK
WVASLTESALSPVYLQADWFSASFQGLDQQLGVSTISRAPTGTKEHHVILSITSRTMSVK
SRLGEPVTLDCNFWVDPSTPLSASGFAVEWRYQTRGDGRLILAYDGKLDRLADTHETGAF
LDFEALHERGNASLVLEEAKVRHSGTYICTIYLPYLLAQVAMELEIVEPPSLSIHPSPLP
LAVPGQTLNLQCEASGFAPLPLEMSWEFKGADGKSRSLGSGRMSGHRQAWDGTYSQSSRL
ELDTSKLDLGRGGEVTCVAAHAGGTRRASVTLNVIGFSSPSIEDSMAMVGVALVLYGLIK
FVSWSFTGSGSNKADGEDKKEK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttttctacaatttataaactgtctattatcgccttcatcggctttatccaa
ggctgcagctgcacctgtccagtgatggagtgctggttcgttcaggagaaaccaggcaga
ggaggaggactgacaggagccacaacgcaggagaaatctctgcttcacatcaggaccgac
aaacagagtgaagcagcaggaagccagagcgatgcgactgacatcgaccccagcagagtt
tatgctgtaacagacccttctgccaacctctgccacgcctctctcaacccccccagaggc
tccatccagaagccgcagtgtgagatcaacccgttcctgccgcagccgtccagcctcaaa
tgggtcgcctccctgacagagtcggccctcagccccgtctacctgcaggccgactggttc
tcggcttccttccagggcctggaccagcagctgggcgtctccaccatctccagagctcca
acaggaactaaagaacaccacgtaatcctgagcatcaccagcagaaccatgtcagtcaag
tccagactcggggaaccggtcactctggactgcaacttctgggtcgacccgtccactcct
ctgtccgcgtcgggctttgcggtggagtggcggtaccagaccagaggggacggccggctg
attctggcttacgacgggaagttggaccgcctggctgacactcatgagaccggggcgttt
ctggactttgaggctctgcatgagagaggaaacgcctccctggttctggaggaggctaag
gtccgacactctgggacgtacatctgcaccatctacctgccctacctgctggctcaggtg
gcgatggagctggagatcgtagagcctccatctctctccatccatccttccccgctgccc
ctcgctgttccgggtcagactctgaacctccagtgtgaagcgtcgggcttcgctccgctc
cctctggagatgagctgggagtttaaaggagccgacgggaagtccagatctctgggatca
ggcaggatgtcgggacaccggcaggcctgggacggcacctacagccagagcagccggctg
gagctggacacgtccaaactggacctgggccgaggaggagaggtcacctgtgtggcggct
cacgcaggaggaactcgacgggccagcgtgaccctcaacgttatcgggttcagcagcccc
tccatcgaggactccatggcgatggtcggtgtggcgctggttctctacggactcatcaag
tttgtctcttggagttttactggatcagggtcaaataaagctgatggagaagacaagaaa
gaaaagtaa
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