Xiphophorus couchianus (Monterrey platyfish): 114156532
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Entry
114156532 CDS
T05908
Symbol
atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114156532 (atxn1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
114156532
NCBI-ProteinID:
XP_027892826
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Position
13:12950356..13062510
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AA seq
800 aa
AA seq
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MKSNQERSNECLPPKKRGTSSTLPPESRSPAIPPVHDRPENTACYVSAAGGNESNITAHH
SSNKTDGPQYKSPSTLSDSSTSSSSLRLVSSLPTVYTSPLSQPTIGGTVHYTQLPPNMQF
IASSYTTPYTSYISPQILPPPLPPSPLSSSSATQRPSYTESSPAQTLVTKQEQHRASLGR
TSMPPPSTDPFPHHIQMSTSPRTVSSPHHQGGTHLLSQSMHHHQSLGKYTDGYSRKEEGT
RPRELHNGELERGRRFGPPPEPGLLKSGGKSREDRSSLSSFEARHLVLPSDYSTHDHLGL
RTSVMLIPNSHGDHQLVPPRASPEKLTASMPTHMEKGSMGKPVSRPPSSSNTTCSFTFPP
PLSADSLKAAVSTLPPQTVIQTTHNASEPLSMGLPSTSIYPQQPFIGYITGPSGSSYHTG
LQQHLLIPGTQPVIIPVSGGGVPTLEPVTSHITSSTQAAPFPATLPHTYIAATAPKGETV
ETQGGTFHVAAPGAVVQAQLHLPIVPAPPGLVAASTPPAHSSTVVSPSLPPYFIKGSIIQ
LADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIEGSHTSPNFAVVQFSVGEHRTQV
SVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVCISLTLKNLKNGSLKKTQS
PEPENNASVPHSSHGHLKPPRAISEASQSCSVGNSRHRERENGISQRGSGESGSGSGGDS
RVENGDLTFGERGSVSKDQVARSTDPSSSKPSGSRKRRWSAPEGRKVEKSEEEPPLTLPK
PSFIPYDVKVSIEGRSNIGK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggaacgcagcaatgaatgtctgcccccaaaaaagaggggcacatca
agtacattaccacctgaaagtcgctctccggctataccacctgttcatgacaggccagag
aacacagcctgctatgttagtgcagctggtggaaatgaaagcaatattactgcacatcat
agctccaacaaaactgatgggccccagtataaatccccctccaccttatcagactcttcc
acctcctcttcctctttgaggctagtatcatctctccccacagtgtacacatccccccta
tctcaacctacaattggaggaacagtccattatacacaactgcctcccaatatgcagttc
atcgcttcatcgtacactactccatatacaagctacatttctcctcagatactcccaccc
cctctccccccttcccctctctcctcctcttcagccacacagagaccatcgtacacagag
tcgtcacctgctcagacgctggtcaccaaacaggagcagcatcgagcgtccttgggacgt
acctccatgcctcctccttctacggacccttttccccatcatattcaaatgtcaacgtca
ccaaggactgtgtcatcacctcatcaccaaggaggcactcacctactgtcccagtccatg
catcaccaccaatcattggggaaatatacagatggctatagcagaaaggaggaaggaacc
agacccagagagctccataatggggagctagaaaggggtaggagatttggacccccacca
gagcctggcctcttaaagtcaggaggtaaatcaagggaggacaggtcctccttgtcttcc
tttgaggctcgtcatctggttttgccgtcagactactctactcatgatcacctagggtta
agaacctctgtcatgttaatacctaatagccatggggaccaccagttggtaccacccaga
gccagccctgagaaactgacagcttctatgcccacacacatggagaaaggcagcatgggt
aagcctgtcagtcgcccaccctcatcatccaacaccacctgctctttcacatttccacct
ccactaagcgcagacagtctgaaagcggctgtcagcacactgccgccccagactgttatc
cagaccacccacaatgcttcagagccactgtcaatgggactcccttcgacaagcatctac
ccacagcaaccttttattggttacattacagggcccagtgggagcagctaccacaccggc
ctacagcaacacttgctcattccaggcacccaaccagtcatcatccctgttagcggaggt
ggggtccccacactagagcctgtaacctcccacattacttcatcaactcaagctgcacct
tttcctgctacactccctcacacatacatcgctgccactgccccaaaaggagaaactgtg
gaaacccaaggtggcacgttccacgtggctgctccaggtgcagtggttcaagcccagctt
catctccccattgttcctgctccaccagggcttgttgcagcttccactcctccagctcat
tcaagtacagtggtgtccccctcactcccgccatattttatcaagggttccatcatccag
ctggcagacggcgagctgaaacgcgtggaggacctaaagacagaggacttcatccagagt
gcagagattagcagtgagttgaagatcgattcatccacagtggagcgtatagaagggagc
cacacctcacctaactttgctgttgttcagttctctgttggtgagcatcgcacacaggtg
agtgtggaggtgttgcttgagtaccccttcttcgtgtttggccaaggatggtcttcatgt
tgtccagaccgaaccactcagcttctggagctgccttgtacaaagctttctgtgggtgat
gtttgtatttcacttactctcaaaaacctgaagaacgggtctctgaagaagacacaatct
ccagaaccagaaaacaatgcttcagtccctcactctagccacgggcaccttaaacccccc
agagccatctcagaagcatcccagagctgcagtgtgggaaattccagacacagagagcgc
gagaacgggatcagccagcgggggagcggtgaaagcgggagtgggagtggaggagactcc
agagtggaaaatggagatctcacatttggggaaagaggatctgtttccaaagatcaggtt
gccaggagcacagaccccagctccagtaagccgtcgggcagcagaaagcggaggtggtct
gcccctgagggtcgaaaagtagaaaaatcagaagaggagccccctttgaccttgcccaaa
ccttccttcattccttacgacgtgaaagtcagcattgagggaaggtcaaatattggcaag
taa
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