Xiphophorus couchianus (Monterrey platyfish): 114156588
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Entry
114156588 CDS
T05908
Name
(RefSeq) syncoilin-like isoform X1
KO
K10377
syncoilin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114156588
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
114156588
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF6988
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
114156588
NCBI-ProteinID:
XP_027892901
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All DBs
Position
13:5876144..5887801
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AA seq
689 aa
AA seq
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MEDQEEDLSTGFGPLFIREEQGDTDGSIVEQSDGNQNPKGQNFTGKPGKQPMPYLQEMDV
LLKSCEKLTGIPFRSRHIEGYSEASLSKSSWNRGKEEIRTETHVEASSSPQDSSSSCYID
THMDRTETKAERAESQNLGTIIHRHGTSYHSEMPLSSVGNNLCASMVECEGQLLGMLAML
ESCMEEAGMEFEPQDRAADAGQDYVHIRKDPQHPTGTAQTEDQPESQTLLPVNADSFGKG
NNASEAGEIGEAINSARKGSPHDHLVGCSKERPERQSNLVVDQRPDFLFSDLQVPLEQAN
QDPKVCGETSTGQRFNEEIETIEDIAKAGIDDINMTEERYKTDLESDMNRLRSQMEDCIE
EVQRLEKRRKELLLEVLQLRGPRDEEDVERGSRDEEETEESIDRKAVELFTILRAEEEGR
REERKREIQGLREERAEEERKTWKVNLERQGLQDELRRLRRKLFTVARDCAQSQATLNNQ
RCDVELLKTEEEKLNSLVLQLTEETCQLRSDQQEQVLELEAELQRRSSGQTSNPQEDLTE
CRRNSCEDVQQYVQGGLKALEDRYEPILEALLKRKEAAAGALLKAKEQSQELRVQVKPLR
EEIQKLELERTCLEERLKLTYMQRQEDAGRHKEAVRFLEERIRELRTELEIQKRKTKDLE
ELRENLTKQLLLYRTPTEVHHSCDQQGRT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagaagaggacttatctactggatttgggccactctttatcagagaagaa
cagggggatacagatggaagcatcgtggaacagagtgatggtaaccaaaaccccaaaggg
caaaacttcactggaaaaccgggtaaacaaccaatgccatacctacaggaaatggacgtc
ttactgaaaagttgtgaaaagcttacaggtattccttttagatcacgccacattgagggt
tactccgaagcaagtctgagtaagtccagttggaatcgaggcaaagaggagatccgaaca
gaaacccatgtcgaagcaagcagttctcctcaagatagcagttcctcctgctacattgac
acacatatggaccggactgaaacaaaagccgaacgggcagaaagccaaaacttaggcaca
ataatccacaggcacgggacgtcttatcactcagagatgcctctatcctcagttggcaac
aacctgtgtgccagcatggtggagtgtgagggccagctgttggggatgttggccatgctt
gaaagttgcatggaggaggctggcatggagttcgagccacaagatcgggcagcagacgca
ggccaagactatgtgcacatccgaaaggatccacaacatcctactggtacagcccagacc
gaggatcagccagagagccaaacactgttgccagtgaatgctgattcttttggcaaaggc
aataatgcttcagaggctggtgagattggagaagcaataaattcagcaagaaaaggaagc
ccacatgatcatttggttggttgctcaaaggagagaccagagaggcaaagtaatcttgta
gtagatcagaggcctgacttcttgttttcagatctgcaagtgcctctggagcaagcaaac
caagatccaaaggtctgtggggaaacaagcactggacaaaggttcaatgaagagattgag
actatagaagacattgccaaagcaggaatagatgacataaacatgactgaagagagatat
aaaacggatcttgagtcggacatgaatagattgaggtctcagatggaggactgcatagag
gaggtgcagcggttggagaaacggaggaaggagttactgttggaggtgctgcagctgaga
gggcccagagacgaagaggatgtggaaaggggaagcagggacgaagaggagaccgaggag
tcgattgacaggaaagctgtggagctgttcactattctcagggcagaagaggagggaagg
cgagaggagagaaaaagggagattcaaggcctcagggaagagagggcagaggaagagagg
aagacatggaaggtgaatctggagagacagggactgcaagacgaactcaggaggctgagg
aggaagctgtttactgtggcaagggactgtgcccagagtcaggcaacactaaacaatcag
cgctgtgatgtggagttactgaagacggaggaggaaaagttgaactctttggtgttgcag
ctgacagaggagacttgtcaactcagatcagaccagcaggaacaagtgttggagctagaa
gcagagcttcagcgcagaagctccggccagacctccaaccctcaggaggacctgactgag
tgcaggaggaattcctgtgaggacgtccagcagtacgtccagggtgggctgaaagcattg
gaagacagatacgagcccattttggaggcactgctgaagagaaaagaggcagcggctggt
gccctgctgaaagccaaagagcagtcccaggagctgagggtccaggtcaaacctctgagg
gaggagattcagaaactggagctggagaggacctgtttggaggagagactcaaactgacc
tacatgcagaggcaggaggatgcaggtcgccacaaggaagctgtgcgttttctggaggag
agaatccgagagctgaggacagagctggagattcagaagagaaaaacaaaggacctggag
gagttgagagaaaacctcaccaagcagctcctgctttacaggacaccgactgaagtccac
cacagctgtgatcagcaaggaagaacatga
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