Xiphophorus couchianus (Monterrey platyfish): 114156602
Help
Entry
114156602 CDS
T05908
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114156602
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114156602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2HE
zf-Vps39_C
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
114156602
NCBI-ProteinID:
XP_027892931
LinkDB
All DBs
Position
13:25710410..25719344
Genome browser
AA seq
712 aa
AA seq
DB search
MKLESSLSDMNAWREVDFALNCTYIVPDQVSDPSFSLPKAMTSIPRNLTFDYSADNEVTG
VFSKEYIPQGTRFGPLQGDLYTKDSVPKEANRKYFWRIYSGGQLQHFIDGYDVQKSNWMR
YVNPARCLAEQNLVACQNGRDVYFYTIRPVEPKQELLVWYSQEFAQRLCSQQGDLRHKHS
DEEHPKQHLPQQTFLQGRTKEEVKEQLEDGEEKIDVEMLERDTPPDTPDDQIMDFSRKMD
REEDPEGRGVIPSPQPDRREALLGLNHPYLSDHHPSLPAPHRGLPLHLHGLYGHREGLVS
SYPPLYSHSRHLQPPYQFLPPYGPHYPRLILPPYSPPFPSVIPSRGSLRYSSYLGTDGVP
YPPIAPPNLLPVSLPYAPSSQGGLKELTPNVSPPRGAPATPELSPPAKPDSYHPSPEQSP
SSCEEAMNLSLALNKSSTAPRNGPGHKSLPYPLKKQNGKIKYECNICSKTFGQLSNLKVH
LRVHSGERPFQCHLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLH
SGEKPYQCKLCNTKFTQYIHLKLHRRLHSSRDRPYRCALCSQTFFHRFSLFVHQRSCCLA
NSAGPVNVHMKEMVERFDASQEADTLTETASTSQVGEAVEHWLARTLEGEGKEDQKEATV
LLKALTAAINAPVTPMVPSAVPVSHHSPTLGFQERASVVHLHRRPTVKTEGQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggagagcagcctgtcggacatgaacgcctggagggaggtggactttgctctc
aactgcacctacattgttccggaccaggtgtcggacccgagcttcagcctccccaaagcc
atgacctccatcccacgcaacctcacctttgactacagcgcagacaacgaggtgacaggt
gtgttcagcaaggagtacattcctcagggaactcgctttggccccctgcaaggagacctc
tacaccaaagacagcgtaccaaaggaggccaacaggaagtacttctggaggatttacagc
ggcggtcagcttcaacacttcatcgacggctatgatgtccaaaagagcaactggatgcgt
tacgtgaacccggcgcgctgcctggccgagcagaacctggtggcctgccagaacggccga
gacgtctacttctacaccatccggcccgtggagcccaagcaggagctgctggtgtggtac
agccaggagtttgctcagagactctgcagccagcagggtgacctccgacacaagcacagc
gatgaagagcatcccaaacagcatctacctcaacagacatttcttcagggcagaacgaag
gaggaggtgaaggagcagcttgaagacggtgaggagaagattgacgtggagatgttggag
agagacactcctcctgacacgcctgacgatcagatcatggacttcagcagaaagatggac
agggaggaagatccagaaggccgaggcgtcattccctcccctcagcccgaccgcagggaa
gccctgctgggcttgaatcacccctacctatccgaccaccacccctctctgcctgctcca
caccgaggtctcccgcttcacctccatggcctctacggccacagggagggcctggtctct
tcttacccgccgctctactcccactccagacatcttcagcctccttaccagttcctccca
ccgtacggtcctcactatcctcgcctcatcctccctccctactcccctcccttccccagc
gtcattccttcacgaggatccctccggtacagcagctacctgggcactgacggagtgccg
tacccccccatcgctccacccaacctgctcccagtgtccctgccatacgctccgtcatct
caaggaggcctgaaagaattaaccccaaacgtttcaccaccaagaggcgctccagccacc
ccggagctgtcgccgcctgccaaacctgacagctaccatccctctccggagcagtctccc
tccagctgtgaggaggccatgaacctcagcctggctttgaacaagagcagcacagcgccg
cggaacggacccggacacaaatccctgccctaccccctgaagaagcagaacggaaagatt
aaatacgaatgtaacatctgctccaaaaccttcggacagctctccaacctaaaggtccac
ctccgagtccacagcggtgagagacccttccagtgtcatttgtgcaagaagagtttcacc
cagctggcccacctccagaaacatcacctggtccacaccggagagaagccccatgaatgc
caggtgtgccacaaacgcttcagcagcaccagcaacttgaaaacacatctgcgactgcac
tcaggggagaaaccttatcagtgtaaattatgcaacaccaagttcacccagtacatccac
ctgaagctgcaccggcgcctccacagcagccgcgaccggccctaccgctgcgcgctctgc
tcacagaccttcttccaccgattcagcctcttcgtccaccagcgcagctgctgcctggct
aactccgccggtcctgtcaatgtgcacatgaaggagatggtggagcgcttcgacgccagc
caggaagcagacacgctcacagaaaccgcctccacctctcaggtaggggaagctgtggag
cactggctggcccgtacgctggaaggagaggggaaggaggaccagaaggaggccacggtt
ctgctgaaagccctgaccgccgccatcaacgcaccggtaacacctatggtcccgtcggcg
gtgccggtgtcacaccacagccctactttgggcttccaggagcgggccagcgtggttcac
ctccacagacggccaacagtaaaaacggagggacagtga
DBGET
integrated database retrieval system
