Xiphophorus couchianus (Monterrey platyfish): 114156606
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Entry
114156606 CDS
T05908
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114156606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114156606
03016 Transfer RNA biogenesis [BR:
xco03016
]
114156606
03012 Translation factors [BR:
xco03012
]
114156606
04131 Membrane trafficking [BR:
xco04131
]
114156606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114156606
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114156606
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
114156606
Translation factors [BR:
xco03012
]
Eukaryotic type
Elongation factors
114156606
Membrane trafficking [BR:
xco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
114156606
Exosome [BR:
xco04147
]
Exosomal proteins
Proteins found in most exosomes
114156606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
114156606
NCBI-ProteinID:
XP_027892939
LinkDB
All DBs
Position
13:complement(24831982..24838794)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMSWFKGWKIERKEGGATGVTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPPNLTTEVKSVEMHHESLP
EALPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPQAAENFTAQVIILNHPGQIAQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIITMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKSVEKKAPSGGKVTKSAQKADKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaaaagatccacatcaacatcgtggtcatcggccacgtcgactccggcaag
tccaccaccaccggacacctgatctacaaatgcggcgggatcgacaagagaaccatcgag
aagttcgagaaggaggcggccgagatgggaaaaggctccttcaagtacgcctgggtgttg
gacaagctgaaggccgagcgtgagcgtggcatcaccatcgacatcgctctgtggaagttt
gagaccggcaagtactacgtgaccatcattgatgctcctggacacagggacttcatcaag
aacatgatcactggtacctcccaggctgactgcgccgtcctgatcgttgctgctggtgtc
ggtgagtttgaggctggtatctccaagaacggtcagacccgtgagcacgccctgctggcc
tacactctgggcgtgaagcagctcatcgtcggcgtcaacaagatggactccaccgagccc
ccttacagccagaagagattcgaggagatcaccaaggaagtgagcgcctacatcaagaag
atcggctacaacccggccaccgtcgccttcgtccccatctctggttggcatggagacaac
atgctggaggccagcgacaagatgagctggttcaaaggttggaagatcgagcgtaaagag
ggcggagctacaggtgtgaccctgctggaggccctggactccatcatgccaccttcccgt
cccaccgacaagcccctccgtctgccgctgcaggacgtctacaagatcggcggtatcgga
accgtccccgtgggtcgtgttgagaccggcatcctgaagcccggcatggtcgtcaccttc
gctccccccaacctgaccactgaggtgaagtctgtggagatgcaccacgagtctctgccc
gaagctctgcccggcgacaacgtcggcttcaacgtgaagaacgtctccgtcaaggagatc
cgccgtggcaacgtggctggagacagcaagaacgacccgcctcaggctgcggagaacttc
accgctcaggtgatcatcctgaaccacccgggccagatcgcccagggttacgccccggtt
ctggactgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cggcgctccggcaagaagctggaggacaaccccaaggccctgaagtccggcgacgccgcc
atcatcaccatggtgcctgggaaacccatgtgtgtcgagagcttctcccagtacccccca
ctgggtcgcttcgccgtccgcgacatgaggcagacggtggccgtgggcgtcatcaagtcg
gtggagaagaaggctccgtccggcggaaaggtcaccaagtctgcgcagaaggccgacaag
aagaaatga
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