Xiphophorus couchianus (Monterrey platyfish): 114157081
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Entry
114157081 CDS
T05908
Name
(RefSeq) obscurin-like isoform X1
KO
K19574
obscurin-like protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114157081
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
114157081
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
ig
I-set
Ig_4
Motif
Other DBs
NCBI-GeneID:
114157081
NCBI-ProteinID:
XP_027893634
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Position
14:6136924..6158557
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AA seq
1951 aa
AA seq
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MGRTLLCVPGVVLLGVLLCRGNPTDKTRPVLTVSPSWLSPGASVTLNCEVKPSSAGWRFY
WYKAVPEASQDKYKYELVPGSAGGTKNDHYKINGQKHTAGYACRAGRGTPELFTQYSEPK
LVWSGASHPAASLTLSPMKIKHYTVDEIQLTCSGNSAVWKVRRFRQYYPSDASDCSAWGK
MTGPTCSFSSRWYQKAVYWCESGSGEFSNAVNVTIHPPRAVLTVSPLWLSPKAPITLSCQ
VEPPSTLWRYYWYRAVPDQSKYSYRYDPLRGTHKGTATNSYATQGQKHTAGYTCRAGRGD
PEIFTDYSKITLSWSAESHPAASLTVSPTREKLFTGDEVQLKCSGSPGSWRVRRFRQSSY
NSDVSDCFSWGTMSGSLCTFRSRWQQTAVYWCESGSGQLSNAINITIHAAPKAVLTVSMQ
WASPGASVTLSCEVKPSSPGWKFYWYKAVPEQPDTYKYLPLNEGTHDTLQDSYVVHDQKH
TAGYACRAGWGVPEYFTNYSEPKIVWSADSHPSAALTVSPARDNLYTVDEVQLTCTGSSG
VWRVRRFRPYYQSDVSDCSVWGTMTESSCIFSSPQYHKGVYWCESGSGEFSNAVNITIHA
TPKPVLTVSTSWLSPGASVTLSCDIKPASAEWRFYWNKAVPDLPQNKYRYELLSDSVSGT
AQASYVVHGETHTAVYACRAGREKGQYFTDYSEPKFVWSADSNPAASLTVSPDRDKLYIV
DDIQLKCTGSSGDWRVRRFRQSYYKADLSDCSSWGTMAGPLCTFSNPVYRRAVYWCESGS
GQFSNAVNITVESAPKPQLTVSPSWLSPGVSVTLICEVKPSSTGWRFYWYKAVPHLSKKS
YKYDPLPDVTAGTVENVYIVYGQTHTAGYVCRGGKQNPELFTEYSEPKIVWSAASNPEAS
LTVSPERKKLFTNEKIQLICTGRLADWRVRRFRQSYYQSDSSNCTVWGKMTGSSCTFTSP
ESDEAVYWCESGSGEFSNAVNITLKPAPRPQLTVSPSWPSPGDSVTLSCEAEPPSAGWRF
YWYKAVPDLSNGYTYDLLADSIKGTVQDFYVVHGQTHTAGYACRAGVGNPQIFTNYSEPK
IVWSADSHPAASLAVSPDREKFYIVDDIQLKCTGRSADWRVRRFSYSHDQSDSSDCSSWG
TMTGSSCTFSSPEQRRAVYWCESGSGEFSNAVNITVNYAPKPTLFVSPSWPSPGASVTLR
CEVEPPSAEWRFYWYKAVPDLSQNNYTHDPLSDVTVGTVENVYIVFGQKNTAGFSCRAGK
QNPEYFTAYSEPRFVWSADSNPAASLTVSPDRDKLYVVDDIQLKCTGSSADWRVRRFRQS
YDQSDVSDCSSWGTMTRSSCMFSDLQYSVALYWCESGSGEFSNAVNITINFVQTPRLTVS
PSWLSPDAAVTLRCEVEPQSAGRRFYWYKAAPDLSQIKFKYDLLPDSVDGTVENSFVIHE
QKHTAGYACIAGWENVEYSTNYSEPQFVWSADAHPAASLTVSPVREKLFTFDEVHLSCTG
SSAEWRVKRLTESSYSDCSIWGIMIGSLCSFSSRWFHKAVYWCESGSGEFSNAVNITIHL
APMLHLTVSPSWLSHGASVNLNCEVDPPSEGYRFYWYEAVPDLSRNGYRYELLPDNVNGT
RQDSLVIHGQRHTAGYACRVGYGNPEFLSRYSEPKFVCSPVSRPAASLSVSPDREQHFTS
ESVTLNCGGNSTEWRVMVTSELSFSSYTDSCSTWGAMNGSLCTFSSPQYSKATLWCESES
GELSNAVNLTVQDEDLLLVSPVHPVTEGASVTLSCITREENKLSNVTFYHNNKLRQNDDR
GELNISAVSQSDEGFYKCEHSGKVSSQSWVAVEAVLKQSSSSFPVMWAVGPVCGIVLVVL
LLLLIRFIRFKGTSYFYDLVRPTKEPENDPKKGQSISYSLLNFKNTGNMRCYLEPDDSPV
NYDLRVGAAGRSSSAAANAAVYSEVKSDSGY
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcacgttgctctgtgtgccgggtgttgtacttctcggtgtactcctctgccgt
ggaaacccgacagataaaacgaggcctgtcctgactgtgtctccatcatggctgagtccc
ggagcctcagtgacgctgaactgtgaggttaagccttcttcagcaggatggaggttctac
tggtacaaagctgttcctgaagcctcccaggacaaatacaaatacgagctggtgcccggc
agcgccggcgggaccaaaaacgaccactacaaaattaatggacagaaacacacggcagga
tacgcatgcagagctggacgaggaaccccggagcttttcactcagtacagcgaaccgaag
cttgtctggtcaggagcttctcacccagcagcgtctctcacactgagtccgatgaaaata
aagcactacaccgtcgatgaaatccaactgacgtgtagcggaaactctgctgtctggaaa
gtgaggcggttcaggcagtactacccgtcggacgcatcggactgctccgcctgggggaaa
atgactggacccacgtgcagcttcagcagtcgctggtaccagaaggcggtgtactggtgc
gagtctggatccggagagttcagcaacgcagtcaacgtcactatacacccaccgagggca
gtcctgactgtgtctccattatggctgagtcccaaagccccgataactctgagctgtcag
gtggaacctccgtcgacattatggaggtactactggtacagagccgttcccgaccagtcg
aagtacagctacagatacgacccactgcgcggtactcataaagggactgcaaccaactcg
tacgccactcagggacagaagcacacagcaggatacacatgcagagctggaagaggagac
ccggagatcttcactgattacagtaaaatcacactgagctggtccgcagaatctcatccg
gcagcttctctcacggtgagtcctaccagggagaaacttttcacgggcgatgaagtccag
ctgaagtgcagcgggagccccggctcctggagagtgaggaggttcagacagtcgtcctac
aactcggacgtgtccgactgcttcagctggggcaccatgtccggctccttgtgtaccttc
cgcagtcgctggcagcaaaccgccgtgtactggtgcgagtctggatcgggacagctgagc
aacgcgatcaacatcaccatacacgccgcaccgaaggctgtcctgactgtgtctatgcaa
tgggcgagtcctggagcctcggtgactctgagctgtgaggttaagccttcgtcaccagga
tggaagttctactggtacaaagctgttcctgaacagcccgacacctacaaatacctccca
ctgaatgagggaacccatgacacgctacaggactcctacgtcgtccatgatcagaaacac
acggcagggtacgcatgtagagccggatggggagtcccagagtatttcaccaattacagc
gagccaaagatcgtctggtctgcagattctcacccgtcagcagctctcacggtgagtcct
gccagagacaacctttacactgtcgatgaagtccagctgacatgcacaggaagctctggg
gtctggagagtgaggcggttcagaccgtactaccagtcagatgtatcggactgctccgtc
tgggggacaatgactgaatcctcgtgcatcttcagcagtccccagtaccacaaaggagtg
tactggtgtgagtctggatcaggagagttcagcaatgcagtcaacatcacaatacacgct
acgccgaagccagtcctgactgtgtctacatcgtggctgagtcctggagcctcagtgact
ctgagctgcgacattaaacccgcatctgcagaatggaggttctactggaacaaagccgtt
cccgatctgccgcagaacaagtacagatacgagctgctgtctgacagcgtcagcgggacc
gctcaggcgtcctacgtcgtccacggagagacgcacacggctgtgtacgcctgcagggct
ggaagagaaaaagggcagtatttcaccgattacagtgaaccaaagtttgtctggtccgca
gattctaacccagcagcgtctctcacagtgagtcctgacagagacaaactttacatcgtt
gacgacatccagctgaaatgtacaggcagctctggtgactggagagtgaggcggtttaga
caatcatactacaaggcagatttatcggactgctccagctggggaacaatggccggaccc
ttgtgcacctttagcaatcccgtctaccgcagagcagtgtactggtgtgagtctggatct
ggacagttcagcaatgcggtcaacatcactgtagaatctgcaccaaagccccagctgact
gtgtctccatcatggctgagtcctggagtctcggtgactctaatctgtgaggttaaacct
tcttctacgggatggaggttctactggtacaaagctgttcctcatctctcaaagaagagc
tacaaatatgatccactgcctgacgttaccgcagggactgtagagaacgtctacatcgtc
tatggacagacgcacacagcaggatacgtatgcagaggtggaaaacaaaacccagagctt
ttcaccgagtacagtgaaccaaagattgtctggtctgcagcttccaatccggaagcgtct
ctcaccgtgagtcccgagagaaagaaacttttcaccaatgagaaaatccaactgatctgc
acgggacgcttggctgactggagagtgaggaggtttcgacaatcgtactaccagtcggac
tcgtccaactgcaccgtctgggggaagatgaccggctcctcgtgcaccttcacaagtcca
gagagcgacgaagcggtgtactggtgtgagtccggatcgggagagttcagcaatgcggtc
aacatcactttaaaacctgcaccaaggccccagctgactgtgtctccatcatggccgagt
cctggcgactcagtgactctgagctgtgaggctgaacctccatcagcaggatggaggttc
tactggtataaagctgttccagatctatctaatggctacacatatgatctgctggccgat
agcattaaggggactgtgcaggacttctatgtcgttcacggtcagacacacacagcgggg
tacgcatgcagagctggagtcggaaacccacagatcttcaccaattacagtgagccaaag
atcgtctggtcagcagattctcacccagcagcgtctctcgcagtgagtcctgacagagaa
aaattttacatcgttgacgacatccagctgaaatgtacaggacgctctgctgactggaga
gtgaggcggtttagctattcacacgaccagtcagactcatccgactgctccagctgggga
acaatgactggatcctcgtgtaccttcagcagtcctgagcagcgcagagcagtgtactgg
tgtgagtctggatcaggagagttcagcaatgcggtcaacatcactgtaaactatgcacca
aagcccacactgtttgtgtctccatcatggccgagtcctggagcctcagtgactctaaga
tgtgaagttgaacctccatctgcggaatggaggttctactggtataaagctgttcctgat
ctttcacagaacaactacacacatgatccactgtctgacgttaccgtagggactgtagag
aacgtctacatcgtctttggacagaaaaacacagcaggattttcatgtagagccggaaaa
caaaaccctgagtatttcactgcttacagtgagccaaggtttgtctggtctgcagattct
aacccagcagcgtctctcacagtgagtcctgacagagacaaactttacgtcgttgacgac
atccagctgaaatgtacaggaagctctgctgactggagagtgaggcggtttagacaatca
tacgaccagtcagacgtatcagactgctccagctggggaacaatgaccagatcctcgtgt
atgttcagcgatctccagtacagcgtagctctgtactggtgtgagtctggatcaggagag
ttcagcaacgcagtcaacatcaccataaactttgtacaaacgccccgactgactgtgtct
ccgtcgtggctgagtcccgacgccgcggtgactctgcgctgcgaggtggagcctcagtct
gcaggaaggaggttctactggtacaaagctgctcctgatttgtcgcagattaaattcaaa
tatgatttgctgcctgacagtgtcgatgggacagtagagaactccttcgtcattcacgaa
cagaaacacacagcaggatacgcgtgtatagccggatgggaaaacgtagagtattccact
aattacagtgaaccacagtttgtctggtcagctgatgctcacccagcagcgtctctcaca
gtgagtcccgtcagagaaaaacttttcactttcgacgaagtccatctgtcctgcacagga
agctctgctgagtggagagtgaagaggctcacagaatcgtcctactcggactgctccatc
tgggggataatgatcggatccctgtgcagcttcagcagccgctggttccataaagcagtg
tactggtgtgagtctggatccggagagttcagcaacgcagtgaacatcactatacacctt
gcaccgatgcttcacctgactgtgtctccatcatggctgagtcacggagcctcagtgaac
ctgaactgtgaggtggatcctccgtccgaaggatataggttctactggtacgaagctgtt
cctgatctatcaagaaatggctacagatatgagctactgcctgataacgtcaacgggacg
aggcaggactccctcgtcattcatggacagaggcacacagcaggatatgcatgtagggtg
ggatatggaaacccagagtttctctctcgatacagtgaaccaaagtttgtctgttctcca
gtctcccgtccagcagcttctctctcagtgagtcctgacagagagcaacacttcacctct
gagtctgtgactctgaactgtggaggaaactctactgagtggagagtgatggtgacgagt
gaattaagcttctcatcgtacaccgactcctgctccacctggggggcaatgaatggatcc
ttgtgtaccttcagcagtcctcagtactctaaagcaacgttgtggtgcgagtctgaatca
ggagagctcagcaacgcagtcaacctcactgtacaagatgaagatcttctcctggtgagc
cccgtccatcctgtgactgaaggagcttctgttactctgagctgcataacgagagaagaa
aacaaactttctaatgtgactttctatcacaacaacaaactgagacaaaatgacgacaga
ggagagctgaatatctctgcagtgtctcagtcagatgaaggtttctacaagtgtgaacat
tcaggaaaagtttcttcacagagctgggtggctgttgaagctgttttaaaacagagcagc
tcttcatttcctgtaatgtgggccgtcggaccggtttgtggaatcgtccttgttgttctc
ctgctgcttctgattcgcttcataaggttcaaaggcacttcctacttctacgacttagtg
agacccactaaagaacctgaaaacgatccaaagaaaggtcaaagcatctcctactctctc
ctaaactttaaaaacactggaaacatgaggtgctatctggaaccagatgacagccctgtc
aattatgacttgagagtaggagctgcaggaaggtccagttcagcagcagccaacgcagcc
gtttactctgaagtgaaatcggactctggatattga
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