Xiphophorus couchianus (Monterrey platyfish): 114157277
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Entry
114157277 CDS
T05908
Name
(RefSeq) neurexin-2-like isoform X1
KO
K07377
neurexin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114157277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114157277
Membrane trafficking [BR:
xco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
114157277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
114157277
NCBI-ProteinID:
XP_027893927
LinkDB
All DBs
Position
14:complement(1624299..2435860)
Genome browser
AA seq
1680 aa
AA seq
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MTRVLRFLCWPLWPLALFSMLATVDMLEFGGATGQYARYGRWEAGSVGELSFSLKTNVSQ
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPAILHMETLVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPLDVRLSALTSSTVKYEPPFMGLITNLK
VGEMPPTLLNSQGIESDLEYLCTKQNPCFNGGLCSIHYGEVHCDCTHTRFSGKYCKEAEE
YAVEGLAHLTLNDQGDSSLVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIDRDPKITLHGDLVFRCEDVAALDPVTFEAPEAFISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLDGYLYLLIDMG
SGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFLSPEGSEILDLDSDMYLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLSEIQSALGVSSFCTRELQ
KRCSSAPCGNGGLCKEGWNRYICDCTGTGYLGTNCEIEATVLSYDGSMYLKIIMPITMHT
EAEDVALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPET
LFAGQKLNDNEWHSVKVVRRGKSLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLSFNSLPYPDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGNDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKSMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHKVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAILVRVESAKGLGDYLELHIERGKVGVIFNVGTDDITIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNERLALARQRIPYRLGRVVDEWLLEKGRQLTIFNS
QAFIKVGGGEKGRHFQGQMSGLYYNGLQVFKLAAEGDPSVQTQGNLRLVGDVPSVLTTDT
TSTTPLADMSTTIMETTTTMATTTTRKGRSPTMRDSVTQNADDLLVASAECPSDDEDLEE
CEPGNGGELVLPIITVDSLDPPSIATHYPVIPPPPTTYRPFLTLLETTKESVPMPNGRPP
CPLDQEDCEETIEVSGSGEMTETDDEDYYKNSPLVTDRTVLPPPPAVEGGVQNPRDRHFS
RNPNSHRPPLSSTPTANPDQLGPHVKPAAGGSSSSSNNIPAGKMNTRDQVLLPPAHPSSD
PGHRRIPGITYPPNFPHVPTPDPTSPERGLPGAVEVQQSSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPATAKTVTKNKKNKDKEYYV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggtgttaagattcctatgctggcccctgtggcctttggcccttttcagcatg
ctagctaccgtggacatgctggaattcggtggggcaacaggccagtacgcacgctatggc
cgctgggaagctggatccgtgggtgagctcagcttcagtctcaagaccaacgtcagccag
gccttggtgctctatctggacgacggtgggaactgtgacttcttggagctgcttatcgcc
ggcggccgccttcagctgcgtttcgccatccactgtgccgagccggccattctgcacatg
gagacgctggtcaacgacgaccgctggcacatggtcttgctcacccgcaattttcgcgag
actttgctaatggtggatggcgagacaaaagtggccgaggtcaaatcaaagaggaaggaa
atggcggtggtcagcgacctattcgtgggtgggatccctcttgatgtgcgcctttctgct
ctgacctccagcactgtgaagtatgagccacccttcatggggctaatcaccaatctgaag
gtgggggagatgccacccacgctgttaaacagccaaggcattgagagcgacctggagtac
ctctgcaccaaacaaaacccgtgcttcaatggagggttatgctcaattcattatggagaa
gttcactgtgactgcacccacacccgcttcagcgggaagtactgcaaggaagctgaagag
tatgctgtggaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctctagtt
ggcaaggaagagtccgtcgccaccttcaagggcaacgagttcttctgctacgacctgtcc
ctgacccccatccagagcagcactgacgaaataacgctctccttccgaacgctgcaacgc
aacggcctcatgctgcacaccgggaagtcggcagactacgtgaacttgtccctgaagagc
ggcgccgtctggctggtcatcaacctgggctccggggccttcgaggccctggtcgagcca
gtcaacggcaagttcaacgacaacgcctggcatgacgtgcgcgtcacacgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctctgtggatggtattttgaccacc
actggctacacccaggaggactacaccatgttgggctccgatgacttcttctacatcggg
ggaagccccaacacggcagacctgcctggatcaccagtcagcaacaactttatgggctgc
cttaaagatgtggtgtacaagaacaacgacttcaagctggagctctcccggctggccatc
gaccgcgaccctaagatcacgctgcacggcgacctggtattccgctgcgaggacgtggcg
gctctcgaccccgtcacgtttgaagctcccgaagctttcatctcgctgccaaagtggaac
accaagaagacgggctccatctccttcgacttccgcaccaccgagcccagcggactgctg
ctgttcagccacggacgtcctcaggggcccaaagagcagaagcccgggagggaactgaag
accgattactttgctatggagctgctggacgggtatttgtacctgctgatcgatatgggc
tctggaaaaacaaagctcaaggccagcaacaagaaggtcaatgacggagaatggtgccat
gtggatttccagagggaagggaggaaagggtctatctccgtcaacagccgcagcatgcca
ttcctgtccccagagggcagtgagatcctggacctggacagtgacatgtacctgggcgga
ctgcccgagtccaagtcggacctcatcctgccgccagaggtctggacggcgctcctgaac
tacggatacgtcggctgcgtccgcgacctgttcattgacggcaagagccgcgacgtccgc
cgcctgtctgagatccagagcgctctgggcgtcagcagcttctgcacccgcgagctgcag
aagcgctgcagcagtgccccgtgtggcaacggtggcctgtgcaaggagggttggaaccgg
tacatatgtgattgcactggcacaggatacctgggtaccaactgtgagatagaggcaacc
gttctgagttacgacggcagcatgtacctgaagatcatcatgcccatcaccatgcacaca
gaggccgaggacgtggcgctgcgcttcatgtcacagcgggcgtacggcctgctcatggcc
accacctctaaagagtcggcggacaccctgcgcctggagctggacggaggccgggtcaaa
ctcactgtcaacctcgattgtatcaggatagactgtagcctcagcaaaggacctgagacg
ctgttcgcggggcagaagctgaatgacaacgagtggcactcggtgaaggtggtgcggcga
ggcaagagcctgcagctgtctgtggataatgtcacagtggaaggccagatgaccggtgcc
cacacacgcctagagttccacaacatcgagacgggcatcatgacggagcgccgcttcatt
tccgtcgtgccttcaaactttattggccacctgcagggcctgtccttcaacagcctaccc
tacccggatcagtgtaagaacggggacatctcctactgcgaactgaacgcccgctttggc
atgaggcacatcatcgccgatcctgtgacgtttcgaacgaaaggcagctacttagcgtta
gccactttgcaggcctacgcctccatgcacctgttctttcagttcaaaaccaccacgccg
gatggcctcatgctcttcaactccggagatgggaacgacttcattgttgtggaactggtg
aaagggtacgttcactacgtctttgatctcggcaacggcccgtcgctgatgaagggcaac
tcagacaagccgctcaacgacaatcagtggcacaacgtggtggtgtcccgggatgccaac
aatgtacacacgctgaagatcgactcgcgcaccgtgacgcagcactccaacggagcccgc
aacctggacctcaaaggagagctgtacatcggtggcgtgacgaagagcatgtacagcaat
ctgcccaaactgatcgcatcccgggacgggtaccagggctgcctggcctctgtggacctg
aacgggagactccctgacctgatcgcggatgccctccacaaggtggggcaggtggaacga
ggctgcgacggacccagcaccacctgtacggaggagtcctgctaccatcagggggtctgt
ctccagcagtgggagggcttcacctgcgactgcacaatgacgtcctacggaggctcattt
tgcaacgaccctgggacaacgtacatctttggacgaggcggagccctcatcacatacacc
tggccacccaatgaccggccgagcacgcgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaagccattttggtcagggtggagagcgccaagggactgggagactacctg
gagctgcacatagaacggggaaaggtcggcgtgatcttcaacgtgggaacagacgacatc
accatcgaggagagtgcggtgatggtgagcgacggcaaataccatgtggtgcgattcaca
cgcagtggcggcaacgccacgctgcaggtggacaaccagcccgtcatcgaacgtttcccc
tcagggaactttgataatgagcgcctggctcttgctagacaaagaatcccataccgactt
ggtcgggtagttgatgagtggctactcgaaaaaggtcgccagctgaccatcttcaacagc
caggcgttcattaaagtcggtggtggagagaaggggcgccacttccagggccagatgtcg
ggcctgtactacaacggcctgcaggtgttcaaactggcggctgagggcgaccccagcgtc
cagacccagggcaacctgaggctggtgggcgacgtgccctcggtgctcactaccgatacc
acctccaccaccccactggctgatatgtccaccaccatcatggagacgacgaccacaatg
gctacaaccaccacccgcaaagggcgctcgcccaccatgagggacagcgtcacacagaac
gccgacgacctcttggtagcttcagcagagtgtccgagcgacgacgaggatttggaggag
tgcgagcccggaaatggaggtgaattagtgttgcccattataacggtggactccctagac
cccccctctattgccacccactacccagtaattcccccaccccccaccacctatcgccct
ttcctcaccctgcttgaaaccaccaaagagtccgtccccatgcccaacggccgcccccct
tgccccttggatcaggaggattgtgaggagaccatagaggtttcgggttcgggggagatg
acagagacggatgacgaggactattataaaaactcccctctggtcactgatagaactgtc
ctccctcctcccccggcagtcgagggcggggtccagaacccccgagaccgccacttctct
cgcaaccccaactcccatcgcccaccgctttcctccacccccactgccaaccccgaccag
ctaggcccccacgtcaaaccggccgctggcggcagcagcagcagtagcaacaatatcccc
gctggcaaaatgaacacccgggatcaagtgctgctgccgccggcccacccctcgtcagac
ccgggccaccgcagaatcccgggaataacataccccccaaatttcccccatgttcccact
ccagatcccacgtctccagagagaggcctccccggcgccgtggaggtacagcagtccagc
agcaccacggggatggtggtgggcattgtagcggcggcagcgctctgcatcctcatcctg
ctctatgccatgtacaagtaccgcaaccgagacgagggctcctatcaggtggaccagagc
cgcaactacatcagcaactcggccacgcagagcaacggcgctctggtgaaggagaaacag
cccgccactgccaagacggtcaccaagaacaagaagaacaaagacaaggagtactatgtg
tga
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