Xiphophorus couchianus (Monterrey platyfish): 114157316
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Entry
114157316 CDS
T05908
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04150
mTOR signaling pathway
xco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114157316 (lrp5)
04150 mTOR signaling pathway
114157316 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114157316 (lrp5)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114157316 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
114157316
NCBI-ProteinID:
XP_027894006
LinkDB
All DBs
Position
2:33348243..33392205
Genome browser
AA seq
1649 aa
AA seq
DB search
MDLKQRGLEMGGLLAELLLWNCLLMAVDGSPLLLFANRRDVRLVDGDGVRGESAIVVSEL
EDAAAVDFLFDESLIFWTDVSEEAIKQTHWNQSFNSLKEALGTGQAVVVSGLNSPDGLAC
DWLGKKLYWTDSETNRIEVANLDGTSRKVLVWMDLDQPRAIALNPGQRYMYWTDWGEEPR
IERAGMDGSSRKVIVNKNIHWPNGLTIDLVEEKLYWADAKLSFIHRANLDGSVREAVVEG
TLTHPFALTLSKETLYWTDWQTRSIHACNKHSGDKTREILGGIYSPMDIQVLEPYRQPYI
QTPCSNDNGGCSHLCLLSPLQPFYSCACPTGVQLKADGKTCKPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVHDIRHAIAIDYDPVEGFVYWTDDEVRAIRRSYIDGSNAMILVTMDI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISDDLEEPRAIVVDPVNGFMYW
TDWGQHPKIERANLDGTARVVLLNSSLGWPNGLAIDYTAGKLYWGDAKTDKIEVINVDGS
NRQTLLEDKLPHIFGFSLLGEYIYWTDWQSRSIERIHKATAVREIIIDQLPDLMGLKATK
VTETHGTNDCAENNGGCSHLCFWCEQAVRCACPMGLELLSDLRTCVVPEAFLLFTNRDSI
RSISLGTNSNDVAIPLTGVKEASALDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVLEF
GLDYPEGMAIDWMGRNIYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRLLDNPRSLALD
PANGYMYWTEWGGRPRIARAYMDGSTISTLVDKVGRANGLTIDYVEHRLYWTDLDTCMIE
CTNMQGLQREIIVDDLPHPFGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLEL
MLDILVFHSSRQDGTNECSQNNGNCGHLCLATPAGAQCRCAFHYTLNPDGKNCSSPSSFL
LFSQRASISRMVLGDQSPDIILPIHVTRNVRAVSYDPLERLVYWLDGRQNIRRARDDGTM
SSIIVSSPAQQVDNQLHDLSLDPYSRHIYWTCETTNTITVQKMDGRIVGVVVKDDTDKPR
AIVVNAEKGYMYFTTVQEHSAKIEGASLDGTERESLFSTGLIRPVALALDNKLGKLFWVD
ADLKRIESSDLTGANRIVLQDSNILQPMGLTVLGDHLYWIDRQQQMIERVDKLTGEFRTR
IQGRISYLTSIHAAWEMDPSEFASHPCSRDNGGCSHICIAKGDGTSTCSCPMHLVLLQDL
LHCGEPPTCSTEQFTCSTGEIGCIPMAWRCDGFPECDDGSDEMHCPICSAFQYQCDEGNC
IDAQKRCDGEPDCPDKSDEHECDTVCPPNQFRCGDNHCITKKQQCDNYSDCLDGSDELAC
DYISPSSSFIPSNETTNPIGPVIAIILLMFVMGGACFVCQRVVCRRYKGPNGSFPHEYIS
GTPHVPLNFISPSSSQHGTYQGISCGKSTLSSVSLMGSSSSGAPLYDRNHVTGASSSSSS
STKGAFYPKILNPPPSPATDRSLYNTEIFYSSNSPSTTRSYRPYHPVHGGAPPTTPCSTD
VCDSDYTPHHPPAGMPLSGGRWKAPGHAAHGKPTKYYMDLNSDSDPYPPPPTPRSQYMSA
EESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagcagagaggacttgaaatgggtggtctgctggcagagctgctgctctgg
aattgcctgctgatggcggttgatggctcccccctccttctctttgccaaccgaagagac
gtgagattggttgatggtgatggtgtgcggggcgagtcagccattgttgtcagtgaactt
gaagatgcagccgcagtggacttcttgtttgatgagagcctgatcttttggactgacgtc
agtgaggaggccatcaaacaaacccactggaatcagtcgttcaactctcttaaggaggct
ttgggaactggccaagcagtggttgtgtctgggctgaacagtcctgatggattagcctgt
gactggctggggaagaagctctactggacagactcagagaccaatcggattgaagtcgcc
aacctggacggcacctccaggaaagtcctagtttggatggacttggaccagcccagggct
attgcccttaatcctggacaaagatacatgtattggacagactggggagaggaacctcgg
atagaacgcgctggcatggatggcagcagcaggaaagtcatagtgaataagaacatacac
tggcccaatggtctcaccatagacctggtggaggagaagttgtactgggccgatgccaag
ctcagcttcattcacagagccaacctggatggatctgtacgagaagcagtggtggagggc
accctgacccatccttttgcactaacattgtctaaggagacgttatactggactgactgg
cagactcgctccatccatgcctgtaacaaacacagtggagacaaaaccagagagatcctc
ggtgggatttattctccaatggacatccaggttctggagccttatcgacagccttacatc
cagaccccatgcagcaacgataacggaggctgcagtcacctctgcctgctctctccgctc
cagcctttctacagctgcgcctgtccgacgggagtccagcttaaagcagatggaaaaaca
tgcaagccaggtgcagagcaggttttgctgctggctagaaggacagacctgaggagaatc
tcacttgatctgccagatttcactgacatagtgctacaggttcatgacattcgacatgct
atagctatagactatgacccagttgaaggttttgtctactggacagatgatgaggttcgg
gccatacgacgatcttacattgatggcagcaatgccatgatactggttaccatggacatc
aaccacccagatggcattgctgttgactgggtggccagaaacctttactggactgacacc
ggcactgatcggattgaggttaccagactaaatggaacatcacgaaaaattttgatttcg
gatgacctggaggaacccagagccattgttgtggatcctgttaatggttttatgtactgg
acagattggggtcagcatcctaagattgagagagcaaacctggatggaacagctcgggtg
gttctgctcaacagttctcttggctggcccaatggattagccatagactacacagcaggg
aagctttactggggagatgctaaaactgacaagatagaggtgatcaatgtggacggcagt
aacaggcagaccctgctggaggacaagctgcctcatatctttggctttagtctgctgggt
gaatacatctactggaccgactggcagagccgcagcattgagaggatccacaaggccacc
gccgtgcgagagatcatcatcgatcagctgccagatttaatggggttaaaggctaccaaa
gtcacagagacccacggtacaaacgactgtgcagagaataatggtgggtgcagccatctg
tgtttttggtgtgagcaggcggtccgctgtgcttgtcccatggggctggagctcctctca
gacctccggacctgcgtggtgccggaggccttcctgctgtttaccaacagggacagcatc
aggagcatttctttgggcacaaacagcaatgatgtggccatccctctgacaggagtcaaa
gaggcctcggctcttgattttgatgtttcagaaaggagaatttactggacagacatacag
gccaagaccatcagcagagcatacatgaatggcagctccgtggaacacgtcctagagttt
ggacttgactaccctgaaggcatggccattgactggatgggtcgtaacatctactgggcg
gatactggcactaaccgcattgaggtggcccgcttggatggccagtacagacaagttttg
gtctgtaaagacctggataacccacgcctgctggataacccacgatctctagctctggat
cctgccaatggctacatgtactggacagagtggggtggtcgtccccgcatagccagagcc
tacatggacggcagcaccatcagtacgttagtggataaggtgggccgtgccaacggactg
actattgattatgtggagcatcgactctactggactgatttggacacatgtatgattgaa
tgcaccaacatgcaaggccttcagagggagattatcgtggatgaccttcctcaccccttc
ggactcactcagtatagggacttcatctactggacagacttcaacctgcgcagcattgag
cgggctgacaaacgcagcgggctgaaccgcaccgtggtcctgcagggtcagctggagctg
atgctggacatcctggtgttccactcctcccgtcaggatggaaccaatgaatgctcacag
aacaatgggaactgtggccatctctgcctggccactcctgctggggctcagtgccgctgc
gccttccactacaccctgaaccctgacgggaaaaactgtagttcaccttcaagtttcttg
ctcttcagccagagggccagcattagcaggatggtgttaggagaccagagtccggacata
atccttcccattcatgtcacgaggaacgtccgagctgtgagctacgatccgctggagcgc
ctggtctattggctggatggacggcagaacatacgaagggccagagatgatggcaccatg
tcttcaatcatagttagcagtcctgctcaacaagtggacaaccagcttcatgaccttagc
cttgacccctacagtcgccacatttactggacctgtgagaccaccaataccatcacagtt
cagaagatggacggtcgcatcgtcggtgtggttgtcaaggatgatactgataagccaaga
gccatcgtggtcaacgcagaaaaagggtacatgtacttcactactgtacaggagcactct
gctaagattgaaggagcgagtctggatggaacagagagagagtccttgttctccactggt
ctgattagacctgtagctctggctctggacaacaagctgggaaagctgttctgggttgat
gctgatctcaaacgcatcgagagcagcgacctgacaggggccaatcgcattgtcctgcag
gattccaacatccttcagccgatggggctgacagttctgggggatcatctctactggatt
gaccggcagcagcagatgatcgaaagggtagataaactgactggagagttccgcacacgc
attcagggacggatatcatacctgacatctatccacgcagcatgggagatggacccatca
gagtttgcatcccacccttgttcccgagacaatggaggctgttctcatatctgcattgca
aagggtgatggaacatcaacctgctcctgtcccatgcatctggttttactgcaagacctg
ctgcactgtggagagccccccacctgctccacagagcagttcacctgctccacgggagaa
attggctgtatccccatggcctggcgttgtgatggcttcccagagtgtgatgacggcagc
gatgaaatgcactgccccatctgctctgccttccagtaccagtgtgatgaaggaaactgc
atcgatgctcagaaacgatgtgatggagaacctgactgtcctgataagtctgatgagcat
gaatgtgacactgtctgccctcccaaccagttccgctgtggggacaaccattgcatcact
aagaaacagcagtgtgacaattactcagactgtctggatggctctgatgagctggcttgt
gattatatttctccctcctcaagcttcattcccagtaatgaaaccaccaaccccattgga
ccagtcattgccatcattctgctcatgtttgtgatgggaggagcgtgcttcgtctgtcag
cgtgtggtgtgtcggcgctacaagggtcctaatgggagctttcctcatgagtacatcagt
gggacgccccacgtgcctctcaacttcatcagccccagcagctcccaacatggcacctac
caagggatctcctgtggaaagtccaccctgagctcagtcagcctgatgggcagcagcagc
agtggagcccctctctacgacaggaaccatgtgactggagcttcatccagcagctcctca
tctaccaaaggagccttctacccaaagatcctgaaccctcctccatctccggccacagat
cggtctctttacaacacagagatcttctattcctccaacagtccatctacaaccagatca
tacaggccctaccatccagtccatggaggggcccctcctacgaccccctgcagcacagac
gtctgtgacagcgactacaccccccatcatccccctgcgggcatgccgctgtcggggggg
cgctggaaggccccgggccacgccgctcacggcaaacctactaaatactacatggacctt
aactcagactcagacccctaccctccaccccctaccccacgctctcagtacatgtctgct
gaggaaagctgccccccgtccccttccactgaacgttcctacttccacctgtgcccccct
cctccctccccctgcaccgactcatcatga
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integrated database retrieval system
