Xiphophorus couchianus (Monterrey platyfish): 114157447
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Entry
114157447 CDS
T05908
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114157447
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114157447
Factors involved in mRNA localization
Other mRNA localization factors
114157447
mRNA cycle factors
Stress granule specific factors
114157447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
114157447
NCBI-ProteinID:
XP_027894221
LinkDB
All DBs
Position
14:2978824..2999345
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AA seq
669 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ASRNTFHKMTIPVPEDLRDICASDDIHKDFRKAIGANCIFYSAQTHDLIVLSTNDTTVKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRVAPSRPAGPGGDREKGYMTDE
SSNSLHASRTYGGRGRGRRPSNTQYSGYGTNSELSNASESEDVNDRDLRPRGIGGDERGS
RRGGRGRGANSGRGRGGPAAKPSNSISSVLRDPDSNPYALLEGEGELADADLSEGTVGDR
HRRSRRRRNDQEPSVMDAATESDNQAGPSENGLDEEARPQRRNRSRRRRNRGSRPEGGSA
SRDRQPGESVTVADYISRPESQSRQNLPQKENHSGPEPKENGTSAKKEERTPSKRSPNKE
TPTLVNGVS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacggactggccgtggaggttcgcggctcgaacggggccttctacaagggttttatc
aaagatgtccatgaagactcactcactattgtatttgaaaacaactggcagcctgagaga
cagctgccgttcagcgacgtgcggctgcctcctccagccgactaccacaaagacatcggc
gaaggcgaggaggtggaggtctactccagggccaacgagcaggagccgtgcgggtggtgg
ttagcacgggtcaggatgatgaagggggagttttacgtaatcgaatacgcagcttgcgat
gccacatacaacgagattgtcacgtcggagcgcatcaggcctctgaaccccaacagcccc
gcctctcgaaacacgttccacaagatgaccatccccgtcccggaagacctgagggacata
tgtgcaagtgatgacattcacaaagacttcagaaaagctatcggagccaactgcatcttc
tacagcgctcaaacacatgatctcattgtcctgtctacaaatgacacaacggtaaagcgt
gcaacactcctgagtgacatgcatttccgcagcatccgcaccaagctcatcctaatgtcc
cgcaacgaagaagccaccaaacatttggagaccagtaagcagctagcagcagcgtaccag
gaagaggtccgagtcagagaggacctgatgggccttgccattggttcccacggtgccaac
atccagcaggccaggaaggtgcctggagtgacggccatcgagcttgaggaggagagctgt
accttcaggatctacggagagactcctgaagctgtgaagcaggcgagagaatatctggag
ttcaaagaagattacttccaggttcccaggaaccttgtaggcaaagtaatcggaaagaac
ggcaaagtcatccaggagatagtggacaagtcgggcgtggtccgcgtccggatcgaggga
gacaacgacaaaaagcttccccgggaggaggtaggcaggcagggggctggcagagacgac
actgccagcagcaaagagggcatggttccctttgtgtttgttggcactaaggaaaacatc
agcaatgctcaggccttgttggagtaccatgtgtcctacctgcaggaggtggagcagctg
cgcctcgagcgcctccagattgacgagcagctccgtcagatcggggtgggataccgtgtg
gcccccagccggcccgctgggcccggcggcgaccgggagaaaggttacatgacggacgag
agcagcaactctctccacgcatctcgtacgtacggcgggcgtggccgaggacgaagaccc
tccaatacccagtactctggatacggcacaaactccgaactgtcaaatgcttccgagtcg
gaggacgtcaacgaccgcgacctgaggccccgtggcatcggtggggacgagagaggctcc
agacggggaggcaggggccgaggtgcaaactcgggacgggggcgcgggggccccgcagcc
aagccctccaactcaattagctcagttctgagggatccagacagcaacccgtacgctctg
ctggagggagagggcgagcttgcagacgccgacctcagtgagggcacagtgggggaccgc
cacagacgctcccgccggcgccgtaacgaccaggagcccagcgtgatggacgccgccaca
gagtcggacaatcaggccggccccagtgagaacggactagacgaagaagctcgacctcag
cgccgcaaccgaagccgccggcgccgtaaccgtggcagccggccagagggagggtctgcc
agtcgtgacaggcagccgggagaaagtgtgaccgtagccgactacatatcccgtcctgag
tcccagagccgacagaacctgcctcagaaggagaaccactctggacctgaacccaaggag
aatggaaccagtgcaaagaaggaggagcgaactccctcaaagcgttctcctaacaaagag
acgccgactttggtcaatggggtctcataa
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