KEGG   Xiphophorus couchianus (Monterrey platyfish): 114157469
Entry
114157469         CDS       T05908                                 
Symbol
per1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114157469 (per1)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    114157469 (per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 114157469
NCBI-ProteinID: XP_027894272
UniProt: A0A3B5KUF8
LinkDB
Position
14:11768711..11791715
AA seq 1440 aa
MSYDSSTSVPSSSGRGRAPGACSEDREAESLEGNEQKSTCGRSLFNVPGQGQGGASGGGP
GSLSGDQRGSHSDDMDGVSSGNDSGERESEGRRLRDGGTSCGHQSAPSSHSRSSSNGKDS
GMILETTDSSKSSNFQSLSPPNGSLAYSLLSNSSEHDPPSTSGWSSDQSARLQTQKELMK
AIKELKLRLPTERKAKGHSGTLSALKYALQCVRQVRANKEYYHQWSVEECHGCSLDLSTF
TIEELDNITSEYTLKNTDTFSMAVSFLSGKVVYVSPQCSALLRCKPECLQGIMFSELLAP
QDVSTFYSSTAPCRLPSWASCIGSASPPVDCTQEKSMFCRISANRTQGGEMRYQPFRLTP
YQLTLRDSDAAEPQPCCLLIAEKVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPL
LGYLPQDMVGTPILLYIHPEDRPMMVAIHEKIFQFAGQPFDYSPLRMCARSGEYVTIDTS
WSSFVNPWSRKVAFVVGRHKVRTSPLNEDVFTQAMGCETRVTTPDIVQLSEQIHRLLVQP
VHSGSSQGYSSLGSSGSRGSRRSHQQHPSASAASSSDSNGPAMEVAAAASHKPMTFQQIC
KDVHMVKTNGQQVFIESRNRPLPRRNTSAGAAGVRTINSDPIRDLIADITQPPSSLVPAA
LLQKEPSTSYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSCTASSMSDDDKQPDASGNN
KGGSVNLVSEPPPLPPLTMASKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPTI
PTLIAPPLATIPKPRASTSSTPLAPTAPSNTTVAPSPLPPPPPQPQASQPERDSWRSASM
GGGAVGGGGAPGRLGLTKEVLSAHTQQEEQAFLDRFSDLSKLRVLDQTASLNVRGHAPAG
LPRGVRCSRDYPAAGGGTSQRRGRGGKRLKHQESSDQLSSLPVNRQDPRANAAPVPLNMP
LGPPTNSPSWPSVGSQASIPATPFPTGMLPMYPIYPQLPQPLPVPDPTRFPSTQMVPPMM
AFVLPNYMFPQMGLPMAQPGVAPGHFYNPNYAFTGMPPALAPIPSVSNSVPMVGTCPPSR
SSTPQSFTQTPADREGAESPLFQSRCSSPLNLLQLEELPSNRLEVGTALAASQQLPPSVL
GAAAGGQSSINQRSSDDPSKENENAEAVESNQDAMSTSSDLLDLLLQEDSRSGTGSAASG
SGSSGTRSSGSGSGSGSGSGSNGCSSSGTSGTSGSHTSKYFGSIDSSENDHSRKQPAGGG
SSAGGDGGEDQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRNMETVLQEDREALRNLQKH
QPRFTDEQKKELSQVHPWIRTGRLPRAINISGCTGCKCPPSVPPATPFDVEIHEMELCTV
LKTQECSGKDGKALAEAAMDDVQAVDEDEEDEAQRKDAKMEENTEKERLAAETLKDKQET
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgagttatgacagctccacgtctgtgcccagcagcagcggtcgggggcgagcaccgggg
gcctgcagcgaggaccgggaggcagagtcactagagggaaatgagcagaaaagcacctgt
gggcgctcccttttcaacgtccccggccagggacagggcggcgcctccggaggagggccc
gggagcctgtctggagaccagagagggtcgcactcagacgacatggacggcgtctccagc
ggaaacgactcgggggagagggaaagcgagggcaggaggttgagggacggagggacctcg
tgtggacatcagtcggcgcccagctcccacagtcgcagctcgtccaatgggaaggactcc
ggcatgattctggaaaccacagacagcagcaagagctccaacttccagagtctgtcacct
cccaatggctctctggcctacagcctgctgtccaacagctcggagcacgaccccccctcc
acctccggctggagcagcgaccagtcggccaggctgcagacgcaaaaggaactaatgaag
gccatcaaggagctgaagctccgccttcccactgagcgcaaagccaagggccactccggc
accctgagtgctctcaaatacgccctgcagtgtgtcaggcaggtccgagccaacaaagag
tactaccaccagtggagtgtggaggagtgtcatggctgcagtctggacttgtcgaccttc
accatagaggagctcgacaacatcacttcagaatacaccctgaaaaacacagacacgttc
tctatggccgtgtccttcctgtcggggaaagtcgtgtacgtgtcccctcagtgttcagcc
ctgctgcgctgcaagcccgagtgtctccagggaatcatgttctctgagctcctggccccg
caggacgtcagcaccttctacagcagcacggcgccctgccgcctgccgtcatgggcctcc
tgcattggctcagcttctcctcccgtcgactgcacccaggagaagtccatgttctgccgg
atcagcgccaaccggacgcaggggggcgagatgcgctaccaaccattccgcctgaccccc
taccagctcactctcagagactcagacgctgcagaaccgcagccctgctgcctgctcatc
gccgagaaggtccactccggatacgaagctccccgtatccctccagacaagaggatcttc
accaccagtcacactcccagctgcctcttccaggaagtcgatgagagggcagtaccgctt
ttaggctacctgccccaggatatggtgggaacccccatcctgctctacatccatccagag
gacaggcccatgatggtggccattcatgagaaaatctttcagtttgcaggacagccattc
gactactcgcccctgcggatgtgcgcccgcagtggagaatacgtcaccatcgacaccagc
tggtcctccttcgtcaacccttggagcaggaaggtggcgtttgttgtcggacgtcacaaa
gtcagaacgagcccgctgaacgaggacgtgttcacccaggcgatgggctgtgagactcga
gtcaccacgcctgatatcgtccagctgagcgagcagatccaccgactgcttgtccagccg
gtccacagcggcagctctcagggctacagctcactggggtccagcggctcccgggggtct
cgccgttcccaccagcagcaccccagtgcctcagccgcctcatccagcgacagcaacggc
cccgccatggaagtcgccgccgcagcttcgcacaaacctatgacgttccagcaaatctgc
aaggacgtccacatggtcaagaccaacggccagcaagtgttcatcgagtcccgcaaccgt
ccattacctagaagaaacaccagcgcaggtgcagcaggagtaagaaccataaacagtgat
ccaatcagagacttgatagcggacataactcagcctcccagctccttggtacctgcggct
cttctgcagaaggagccctcgaccagttactcctaccagcagatcaactgtctggacagc
atcatcagatatctggagagctgtaacattcccaacacagtgaaaaggaagtgcggctcc
tcctgcactgcctcgtccatgtccgatgacgataaacagccggacgccagcggcaacaac
aaaggtggttcagttaacctcgtaagtgaaccacctcctctgcctcccctgaccatggct
tcgaaggcagagagtgtagcctcagttacgtctcagtgtagcttcagcagcaccatcgtc
catgtaggagacaagaaacctcccgagtcagacattgttatggaagaggctcctacaatt
ccaaccctgatcgccccccctctggctaccatcccaaagcctcgagctagcactagctcg
actccacttgctccaactgcccccagtaatacaactgtagccccttctccccttcctccg
ccgcctcctcaacctcaggcaagtcagccggagagagacagctggcggagcgccagcatg
ggaggcggggcagtaggagggggcggagctccaggccggctgggcctgaccaaggaggtg
ctgtcggcccacactcagcaggaggagcaggcattcctcgaccgcttcagcgatctgagt
aagctgcgggtcctcgatcagacggcgtctttgaacgtgcgcggccacgcccctgctggg
ctgccacgaggtgttcgctgctcccgtgattacccagcagctggaggcggcacctctcag
cgccggggccgcggcggtaagagactgaagcaccaggagtcttcggaccaactcagctcg
ctgcctgtgaaccgacaggaccctcgagcgaacgcagcccccgttcctctaaacatgccc
ctcgggccgcccacaaactccccctcatggccctcggtgggctcccaggccagcatcccc
gccactcccttccccactggtatgcttccaatgtaccccatctacccgcaactgccccag
cctttgcctgtacccgatccgacacggttcccctccacccagatggtacctcccatgatg
gcgttcgttttgcccaactacatgttcccccagatggggctccccatggctcagcccggc
gtcgccccggggcatttctacaaccccaattacgctttcactgggatgccccctgccctc
gcccccatcccctctgtctccaattctgtgccaatggtgggcacctgccccccgtcccgc
agcagcaccccacagtccttcacacagactcccgctgaccgcgagggggcggagtctccc
ctcttccagtcaagatgctcctcccctctcaacctgttgcagctagaggagttgccgagc
aaccggttagaagtcggcactgctttggcagcgtcgcagcaactccctccctctgtgctg
ggcgcagcagctggggggcaaagttcaatcaatcagaggagctctgacgatccatccaag
gagaatgagaacgctgaagctgttgagtccaaccaggacgcaatgtccacttctagtgac
ctgctggaccttctgctgcaggaagactcccgctcaggcactggctcagccgcctccggt
tcggggtcctcgggcacgcggtcctcagggtcaggctccggctccggctccggctccggc
tccaacggctgcagctcctcaggaaccagtggcaccagtggtagccacaccagcaagtac
tttggcagcatcgactcctctgagaatgaccactcccgtaagcagccagcagggggcggc
agcagcgctggaggagacggtggggaagatcagttcatcaagtgtgtgctgcaggacccc
atctggctgctgatggcaaacactgacgacaaggtcatgatgacgtaccagctgcccgtc
agaaacatggagacagtgctgcaggaggatcgtgaagctctcaggaacctgcagaaacac
cagcctcgcttcacggacgagcagaagaaggagctgagccaggtccacccctggatccgt
acgggacgcctgccacgggccatcaacatctccggctgcacgggctgcaagtgtcccccc
tcggtgcctcccgccacgccgttcgacgtggagatccacgagatggagctgtgcaccgtg
ctgaaaacccaggagtgcagcggcaaggacgggaaggctctcgccgaggcggccatggat
gacgtccaggcagtagacgaagacgaggaggatgaggcgcagaggaaagacgccaaaatg
gaagaaaatacagagaaggagagactggcagcagaaactctgaaagacaaacaagagact
taa

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