Xiphophorus couchianus (Monterrey platyfish): 114157498
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Entry
114157498 CDS
T05908
Symbol
rtn3
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114157498 (rtn3)
03036 Chromosome and associated proteins [BR:
xco03036
]
114157498 (rtn3)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114157498 (rtn3)
Autophagy
ER-phagy
ER-phagy recepters
114157498 (rtn3)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114157498 (rtn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
114157498
NCBI-ProteinID:
XP_027894327
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All DBs
Position
14:3800366..3828667
Genome browser
AA seq
1137 aa
AA seq
DB search
MDTQSSQISSSQGFTDGQNSAAKESKLSDSFLSSSPVSLIQSPQDKRGVQSSDKSTEGVA
TSLQFSSQPGSFSPSSYSSDTSPTDGQQDSPIKVSPVSERIKALEALAAKKKEPDFRGNG
TFTHFRDRHHEKSAPEGPKFSTEGSKAAPDGPKSATEGPQSPTKGSKSTPEGPRSPTECS
KSTAESLKSVVEGPKSLAEVPKLPPEKIIQTPQKTEHSADQESPDSPFEILGDLKQVVDF
EETEQWMKTHLPPVPDFDTVGLIKSTNTVSVKGIDMDMPAAFAGVPDAFMDRPVEVPKQN
DQLDGESKKTEVEEFDVNFLPTAYMWDHQEKSSVEDPSNLDLVITASPAPPAEFGSTSPP
SSPTVCSAVHQNVSDEKKAIWTDELEQPEANEGDSSGESDDTVIEDHIAECESAPSQSLD
QSSNDDTTNPPCTTADLSIEEKETPPPRLERKLMQVPTINVIETDEPNYSEEEMEPEAEE
DDDDYEVVKGPDTGPPNTSEPDPQSAENTGPRVRPLETEFMEGYSPPSSPVDSESEYSPK
HKFLHSSSEKDDKASALKSEVCPNPTDSADLQPDQSQTMSNEIGNKKSPFVVENEEVDFP
DNDDDWSDETQEILFKPPMTDPSSQESAPYNKPAVNENRSSTGEEAYIKPTPPPMSSFMQ
DDIYDRQSFDYDFDIGSSLDHTDVKKFNNAKERFLSDPAQNDDAEDKQDLDSAISLNGDD
IPKSDSQPSLEDYPENPYSCFKSETMSSTVEQEVIKKTTNSENVENDNMLPSQKSATHIQ
HNPETGHNINEMKRSPNRTDSGSPPSEPMDSFVEFMRECLKSKQDEEADSVPQELEPHKT
SPLPKASPSMVMDFEQEHLTISALKDLGKSQEEKEETVNPQHKVSEKSQPKSDFSPTQPS
DSKPPCSQTNRASDSKYSSDVEAIDEWVAEAYHLAEHVLTAILTHLSVNDLIHWRDPKKS
GVVFGLSLLLLLSLAAFSVISVVSYMLLALLCVTITFRIYKSVVQAVQKSTEGHPFRELI
EKDVTIPPETFRKHVDTSLTHINRALKQMSRLFLVEDLVDSLKLAVVMWMLTYVGAVFNG
ITILILADILLFAVPPVYEKNKTQIDHYIDLVRTQVNNTIAKLQEKLPGAMKRSKTE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatactcagtcctcccagatatcatcgtcgcaaggttttacggatggacagaattct
gcagccaaagaatcaaaactgtccgattcctttctttcctcttcgcctgtatctctcatt
cagtctcctcaagacaagagaggggtccagagttctgacaagtccactgaaggtgtagct
acatcgctacagttttcttcccaaccaggctcattctcacccagtagttacagtagtgac
acatctccaacagatggacaacaagattctccaataaaggtgtctcccgtttcagaacgt
ataaaggcactagaagctcttgcagccaaaaagaaagaacctgattttagaggcaatgga
actttcactcatttcagggaccgacatcatgagaaatctgcacccgaggggcccaaattt
tccacagaaggttccaaagctgcacctgatggacccaagtctgcaaccgaggggccccaa
tctcccaccaaagggtcaaaatctacacccgaggggcccagatctcccactgaatgctcc
aaatctacagcagagtccctcaaatctgtagttgagggtcccaaatctctagctgaagtt
cccaaacttcctcctgaaaagattatacagacacctcagaaaacagaacattctgctgat
caggagtcaccagattcaccatttgaaatcctgggagacctgaagcaagttgttgacttt
gaagagacagagcaatggatgaagacacacttacctccagtaccagattttgatactgtt
ggtctaattaaaagcactaacacagtctcagtgaaggggatcgacatggatatgcctgct
gcctttgctggtgttcctgatgctttcatggatcgtcctgttgaagttccgaaacaaaac
gatcagcttgacggggaatccaaaaaaacagaggttgaagagtttgacgttaactttttg
ccaacagcttacatgtgggatcatcaagaaaaatcaagtgtggaggatccatctaatcta
gatttggtgattacagcttcccctgcacctcctgcagagtttggttccacatctcctccg
tcatcccccacagtttgctctgctgttcatcagaatgtttctgatgagaaaaaagcaatt
tggactgacgaattggaacagccagaagcaaatgaaggtgacagttcaggagagtccgac
gatacggtaattgaagatcatatagctgaatgtgagtctgctccatctcagtctttggat
caaagttctaatgatgacaccacaaaccctccctgcaccactgctgatctttccattgag
gagaaagagactcctccaccaaggcttgagagaaagctaatgcaggttccaaccataaat
gtgattgagactgatgagcccaattatagtgaagaggagatggaacctgaggcagaggaa
gatgatgatgactatgaggtagtaaaaggcccagacacaggacccccaaacacctctgaa
ccagacccacagagtgctgaaaacacaggccccagagtacgcccgttagaaacggagttc
atggaaggctactcgcctccttcctcacctgtggactctgagtctgaatactccccaaag
cacaagttcctccactctagctctgaaaaagacgataaggcatctgccttaaaatcagag
gtctgtcccaatccaacggactcagcggacctgcaacctgaccagtcccagaccatgtcg
aatgaaattggcaataaaaagtccccatttgttgttgaaaatgaagaagtggattttcca
gacaatgatgatgattggtcagatgaaacccaggaaattctgttcaaacccccaatgact
gatccgtcatcacaagaatcagctccttacaataagcctgcagtcaatgaaaatcgcagt
tcaacaggagaagaggcgtacataaaacccactcctcctcccatgtccagcttcatgcag
gatgacatttatgatagacagtcgtttgattatgactttgatatcggctcttccctggat
cacactgatgttaagaagttcaacaatgcaaaggaacgttttctgtctgatccagctcag
aatgacgatgctgaagacaaacaggatctggacagcgccatttcactgaatggtgacgac
atccccaaatccgatagtcagccatctttggaagattatcctgaaaacccgtattcctgt
ttcaaaagtgagactatgagcagcactgttgaacaggaggtcattaagaagaccactaat
tcagaaaatgtggaaaatgacaacatgctcccatctcagaaatcagctacacacattcag
cataaccctgaaactggtcacaacataaatgagatgaaaagaagtcccaacagaactgac
agtggcagcccaccttctgagcctatggatagttttgtggagttcatgagagagtgtctg
aaatcaaagcaggatgaggaagctgacagtgtcccccaggagcttgagccccacaagact
tctcctctccccaaggcttctccaagcatggtgatggattttgaacaagaacaccttaca
atcagtgctctcaaagatctgggcaagagccaagaggaaaaggaggagactgtgaatcct
cagcataaagtctcagagaagagtcagccaaagtcagattttagccctacacagccatca
gactccaaacctccttgttcccaaaccaaccgtgcatctgacagcaagtattccagtgat
gtggaagctatagacgaatgggtagctgaagcctaccatcttgcagagcatgtcttgaca
gcaatactaacccacttgtcagttaatgacctgatccactggcgggaccccaagaagtcg
ggtgtggtgttcggcctgtccctgcttctgctgctctcgctggcagccttcagtgtcatc
agcgtggtttcctacatgctgctcgccctgctctgtgtcaccatcacctttcgcatctac
aagtctgtggtccaggctgtgcagaagtctactgagggacaccctttcagagagctgata
gagaaggatgtcaccattcctcccgagacgttccgcaagcacgtggacaccagtctgacc
cacatcaaccgagccctgaagcagatgagccgcctgtttttggttgaggaccttgtggat
tctctaaagctggctgtggtcatgtggatgctgacctatgttggagcagtttttaatggc
atcaccatcctcatcctggcggatatcctgctctttgccgtacctccagtctacgagaag
aacaagacccagattgatcattacatcgatcttgtgcgtacccaagtcaacaacacaatt
gcaaaactgcaagagaaacttccgggagctatgaaacgcagcaaaactgaatga
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integrated database retrieval system
