Xiphophorus couchianus (Monterrey platyfish): 114157522
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Entry
114157522 CDS
T05908
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114157522
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114157522
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114157522
NCBI-ProteinID:
XP_027894376
UniProt:
A0A3B5L4M7
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Position
14:complement(3599789..3604728)
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AA seq
304 aa
AA seq
DB search
MYSLMEHELKPNGQPQTHQTTGMSPITGNLTGSMGTNGNSLPKTACPPGGDPMDKVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEY
PDYKYKPRRKTKPLLKKDAQVGKYPLSAGNLLTAAAQNQGGSPRMEGYGWAPTGGYTGMQ
NEALSYTQQLHRYDLSALQYPPAMTAAQTYMSGANSYSPMSYSSSPQQLSPVNMPMVKAE
PVAHSPSTGTPNHHRGALQGDLRDMISMYIPGPGGDSSDPATAQRGYTSVQQHYLSGTVP
LTHI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcttgatggaacacgagctgaaaccaaacggccagcctcagactcaccagacc
accgggatgtcaccgatcaccggcaacctcaccgggagtatggggaccaatgggaactct
ctcccgaaaacggcttgtccacctggaggcgaccccatggataaagtcaaaaggcccatg
aacgcttttatggtgtggtcaagaggacagaggcggaagatggcccaggagaaccccaag
atgcacaactccgagatcagtaagcgactgggagccgagtggaaacttctgaccgatgct
gagaagcggccgttcatcgacgaggccaagagactccgggccgtccacatgaaggagtac
cccgactacaaatacaaaccccgccgcaaaaccaagccgctgctgaagaaggacgcgcag
gtgggcaaatatccgctgtcagcagggaacctactgacggcagcggcccagaaccaaggc
ggcagtccccggatggagggctacggctgggctcccaccgggggctacaccggcatgcag
aacgaggcgctcagctacacgcagcagctgcaccggtacgatctgtccgccctccagtac
ccgcccgcgatgacggcggcgcagacgtacatgagcggagccaactcctacagtcccatg
tcatacagcagcagtccgcagcagctgagcccggtgaacatgcccatggtgaaggcagaa
ccggtggcccattcgccctcaacaggaacgccgaaccaccaccgaggggctttgcagggg
gatctcagggacatgatcagcatgtacattcctggacctggaggggattcctccgatcct
gcgactgcacagaggggctacaccagtgtccagcagcactatctcagtggaacggtgcca
cttacgcacatttag
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integrated database retrieval system
