Xiphophorus couchianus (Monterrey platyfish): 114157524
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Entry
114157524 CDS
T05908
Name
(RefSeq) structure-specific endonuclease subunit slx1-like isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114157524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114157524
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114157524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
T5orf172
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
114157524
NCBI-ProteinID:
XP_027894378
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Position
14:4011482..4014453
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AA seq
264 aa
AA seq
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MMVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHKGGAKRTSGRGPWE
MVLIIHGFPSDISALRFEWAWQHPHSSRRLSHVSRRSKRETSLQFHWRVVSNMLQVAPWS
RLPLTARWLRQEYRMDFDPSLQPPLHIPIAFGNVRAKKKQSLPSAGEDEDVMSVCSLCKA
MVKVSEKLSCFLPFCGMVSHVVCLARYFLRSEPSHLLPVEGQCPSCHGSVLWGSLIRHKH
GCLGDLEEIVSSTSQSHWADELQM
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatggtagtggaggtggagagcttcttcggtgtgtacatgctttactgcactaaccca
aaatttaaaggccgtatctacatcggcttcacggtcaaccctgagcggcggattggacaa
cacaacgccgggaggcacaaagggggcgccaaaagaaccagtggcagggggccgtgggag
atggtactcattatccacggcttcccttcagatatatctgctctgaggtttgagtgggcg
tggcagcaccctcactcttccagacgactttcccacgtctcccgacgttccaaaagagaa
acgagcctgcagttccactggcgcgtcgtctccaacatgctgcaggtggcgccatggagc
aggctgcctttgactgcccgctggctcagacaggagtataggatggactttgaccccagc
ctgcagcccccactgcacatccccatcgcctttggcaatgtgagggccaagaagaagcag
tcgctgccatctgcaggtgaagatgaagatgtgatgtctgtgtgttccctttgcaaggcg
atggtaaaggtgtcagagaagctgagctgtttccttccattctgtgggatggtcagtcat
gtagtctgcctggccagatatttcctgaggtccgagccatcccacctcctgcctgtagag
ggacagtgtccttcctgccatggctcggtgttgtgggggagcctcattcgccataaacac
ggctgcctcggagacctggaggagatcgtttcctccacatcacagagccactgggcagat
gaactgcagatgtga
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