Xiphophorus couchianus (Monterrey platyfish): 114157570
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Entry
114157570 CDS
T05908
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco02010
ABC transporters
xco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114157570
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114157570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114157570
Transporters [BR:
xco02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114157570
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
114157570
NCBI-ProteinID:
XP_027894445
LinkDB
All DBs
Position
14:complement(13686715..13875490)
Genome browser
AA seq
2251 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVGVRSTTKPIHKGQCHYPNKA
MPSAGVLPWLQGIICNIDNPCLDHPTPGETPGQVNNFNNSIIAGMLIELQSVLADRSVLS
KMQLLADDVDQWTSVLSKAEPGKGNRTVILRSILQDNETFSAHLTEGLSVPPDVVQSLMD
AKIQLSSTTGIPRPDNVRSILCKGTDLDDYVQFSSQAQREAFQNVSCSLGEQQLIKTQQV
LLQNVDVRKVLSEIPSAADLNPVDTEALMRKTSADALPLIENAVRLRNSMNFKATESLDF
REDMFGSVNMLLCGKQPNYNFTKMTFGFPSPTQMANNMSTSSMGNSSDAFCQILVDTLEG
TPGLRYIWSTFKPLLQGKILYAPDTPAARLLVKEANSTFNSLAMLKELADSWNELGPRVW
DFLQNSPQVNTLRVLVANPIFAAALNQRLIGTGWTAGLLENFLYNGAPEDRSPGMPPYNW
RDVYNSTTEILKLLSDFLNCLDLNKFEAAATETHLVNKALEHLKNDTFWAGVVFANLHPN
SSHIPPYVKYKIRMDIEEVERTNTLKSRSWSPGARDNSFNDLRYIWGGFAYLQDMIDHAV
IRLQTSKSQPLGVFVQQIPYPCFVDDAFIQSIGTILPMFLVLAFMYSVCMTIKSLVLEKE
LRLKEVLRVVGVQNGALWSSRFTENIVLLTVPCVLISILLKYGKVLQYSDPSVIFVFLLV
FCLATISQCFLISVFFSKANLAAACGGLIFFLLYLPHSLCYAWRDVMGFRAKVAVSLLSC
VAFGYGCENFSKYEEQGIGIQWHNIIRSPEEGDPYTFIVSIAMMLVDAVLYWVLTWYIEN
VFPGQYGIPKPWYFLFTSSYWCGMTPGAENNPDLLTDSGAHIGYFERPPPSVKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALIHGYD
IRTDIDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRSEVDSEMDQMIKDVGLPH
KRKELAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTI
ILSTHHMDEADILGDRIAIISQGKMQCCGSSLFLKKCFGSGYYLTLVRDGTEKITNQRKN
ITQNLSKEEQMETARPSRDSPDDGFGSQTLDNSDRTAGLAAVTQLVRRHVPEAAFLESIG
QEITFILPYSGARDGTFATLFHKLDLAMADLGLTSYGISDTTLEEIFLKVAEETGVDTEM
PSAKEPLVRDWKRSSRESKRNSVASVRAKSEHNGMREVKEKFLNKVEDYKKSASLNGRGS
MVITGWKLIRTQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFKEYPS
LELQPWMYSLPQTTFYSNDMSENLEVSKVTETLLNNPGFGTRCMHGDPIPGLPCSPTYSD
WTIPSVDQSIKDIFLNGNWSMANPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRVQNTTE
TLLDLTGRNMTDFLIKTFEDSGKKRYGGISVGAVNSQVRLSEAEVEDVFRDLKNLLSSSQ
DNVTDQTLQRAETVLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNGILRGNLPKGEEPRH
HGISVSNHPLNLTKEQLSSAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKH
LQFVSGVNPTVYWLTNFVWDMCNYIVPCFIVIVIFLCFQQKAYVSPPNLPALILLLIFYG
WAITPMMYPASFIFSVPSTAYVVLTCVNLFIGINGSVATFIMELIEDDNISRINDIVKQV
LLIFPHFCLGRGLIDMAKNQAMATLFINFGEDRFKNPLSWEMVGKNLLAMSIQGSVMFLT
TILIQYKFFCKPRLISPKQSATEEEDVDVARERQRVCEGRAQNDLLRISNLTKVYPGKST
PAVDQLCVGVPASECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRHVHQ
NMGYCPQFDAIDDLLTGREHLEFYARLRGVPEAEVAMVAEWGIQKLGLIKYANKSAGTYS
GGNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEE
CEALCTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQLTFPDS
VLKEKHHNTLQYQLPYTQGALASIFSHFTSNQHRLGVEDYSVSQTTLDQVFVNFARHQHG
EDDSQAYSNPVDVTDELPMRSLRASREAENA
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttctctctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggttgtggagctgctctggcctctgtttctcttcttcatactggtg
ggggtgaggtctaccactaagccaattcacaaaggtcaatgccactacccaaacaaagcc
atgccatctgctggtgtactgccctggcttcaaggaataatatgtaacatcgacaatcca
tgtttggaccacccaacgccaggagagacaccaggccaagtgaataacttcaacaactcc
ataattgctgggatgttgattgagctgcagtctgtgctggcagacaggtctgttctcagt
aaaatgcagttgctagcagatgatgttgaccagtggacttcagtactgtctaaagcggaa
cctggaaaagggaatcggactgtgatcctaagaagtatcctacaagacaatgaaaccttc
agcgcccatctgacagagggtttgtcagttccaccagatgtagttcaaagcctcatggat
gcaaagattcagcttagttcaacgacgggcatcccaaggcctgacaatgtgaggagcatc
ttgtgtaaggggacagatctggatgactatgtccaatttagcagccaagctcagagggag
gcttttcaaaatgtcagctgctccctcggtgaacagcagctgattaaaacccagcaagtc
cttctacaaaacgtggacgtgaggaaagtgctttcagagattccttcagctgcggacctg
aatccagtggacacagaggcactaatgagaaaaaccagtgcagatgcactgccattgatc
gagaatgcggtcaggctgcggaactccatgaactttaaggcaacagagtccctggatttc
cgggaggacatgtttggaagcgtcaacatgctgctctgtgggaagcagcctaactacaac
ttcaccaagatgaccttcggttttccttcacctacacagatggctaacaatatgtcaact
tccagcatgggcaacagttccgatgccttttgtcagattcttgtcgacaccctggagggc
acacctggtctgcgctacatttggagcaccttcaagccattattgcaagggaagatcctc
tacgcacctgatacacctgctgctcgcctcctggtgaaggaagcaaacagcactttcaac
tctctcgccatgttaaaggagctggcagattcttggaatgaacttggcccacgtgtctgg
gattttctgcagaatagccctcaagtcaacacattgcgggttctggtggcaaatcccata
ttcgcagctgccctcaaccagcgtctcattgggacaggatggacagccgggctgctggag
aacttcctgtacaatggcgctccagaagaccgttcacccggcatgccaccctacaactgg
cgggatgtttacaactccaccactgaaatcctgaagctcctctccgatttcctgaattgt
cttgatctgaataagtttgaagcagctgcgacagaaacccatctggtgaacaaagccttg
gagcatctgaaaaatgacacattctgggctggagttgtctttgcgaacctccatccaaac
tcaagtcacatccctccttatgtgaagtacaaaattcggatggacattgaggaggtggag
cgcaccaacacgttgaaatcaaggtcatggtctcctggagccagggacaactcctttaac
gacctgcgctacatctggggaggctttgcctacctgcaggacatgatcgaccacgctgtt
atacgactgcaaacatcaaagtctcagccgcttggtgttttcgtccagcaaatcccatac
ccttgctttgttgatgatgcctttatccagagtattggaacaattctacccatgttcctg
gtgctggccttcatgtactctgtgtgcatgaccatcaaaagcctggtgctggagaaggag
ctgcggcttaaggaggtgctgcgggtcgttggtgttcaaaatggcgcactctggtcctcc
aggttcacagagaacattgttctgctcacagttccatgtgtgctcataagtatcctgctc
aagtacggcaaagtcctgcagtacagcgacccctcagtaatctttgtcttcttgctggtc
ttctgtttggccaccatctcccagtgcttcctcattagcgtcttcttctctaaggccaat
ttagcggcggcgtgtggcggcctcatcttctttctcctctacctgccacacagcctctgc
tacgcctggagggacgtcatgggtttcagggccaaggtggctgtgagtttactgtcatgt
gttgcctttggttatgggtgcgagaacttttccaaatatgaggagcaaggcattggtata
cagtggcacaacattatcaggagtcccgaggagggggatccatacaccttcattgtctcc
atcgccatgatgctcgttgacgccgtcttatactgggtgctaacctggtacattgaaaat
gtcttcccaggtcaatatgggattcctaagccatggtacttcctgttcacttcctcttac
tggtgtgggatgacaccaggagctgaaaacaaccctgatctgctgacagactctggggcg
cacatcggatattttgaaagaccacctcccagtgtgaaagcgggggtgtcaattcgcaat
cttgtcaaaatctacaagaccgggaagaaactggcggtggacggcctgagcgtggacttc
tatgagaatcagatcacatcatttttgggccacaatggagctggaaaaacaaccacaatg
tcaattctgaccgggctgttcccacctacatcaggaacagccctcatccatggatacgac
atccgcaccgacatagacagcattaggaagtatttgggaatgtgtccgcagcataatgtc
ctatttaatgagctcactgtggaggagcacatttacttctacgccaggttgaagggactt
agtcgcagtgaggttgactctgagatggaccagatgattaaagatgttggtttaccacac
aagcgtaaggagcttgctaagaacctatcaggtggcatgcagcgaaaactctctgtggca
atagcctttgttggcggttcaaagattgtcatcctagatgaaccaacagcaggagtagac
ccttatgctcgccgggggatttgggaactactgctaaagtacaaacaaggtcgcaccatt
attttgtcaacacaccacatggatgaggcagacatcttaggagaccgcatagccatcatc
tctcaaggaaagatgcaatgctgcggctcctcgctcttcctgaagaagtgtttcggcagt
ggctactacctgactctggtcagagatgggacggaaaaaattaccaatcaacgtaaaaat
atcacacaaaatctgtccaaggaggaacaaatggagacagcccgtccttccagggatagt
ccagatgacggcttcggcagtcaaacattggacaattctgaccgtacagcaggtcttgct
gctgtaactcagcttgtgcgccgccatgtaccagaagctgcgtttttggagagcatcggt
caggaaatcaccttcatcctgccctacagtggagccagagacgggaccttcgccacactc
ttccacaagcttgatctcgctatggctgaccttggcctgaccagctatggcatctctgac
accacactggaggagatatttctgaaagtggcagaagaaaccggcgtggatacagaaatg
ccatcagcaaaggagccattggttagagactggaaaagaagctcccgcgaatctaaaagg
aacagcgttgccagcgtccgcgccaaatcagagcacaacgggatgagagaagttaaagaa
aaatttttgaataaagttgaagattataagaaaagtgccagcctgaatggaaggggatcc
atggtcatcaccggttggaaactgatcagaacgcagtttctggctctcttcatcaagcgc
ttccaccacgcccgaaggagccgcaagggacttattgcgcaggtggtcttgcctgctttc
ttcgtgtgcctttctctgatcttctccctcatcgttccaccattcaaagaatatccaagt
ctggagctgcagccatggatgtacagtcttccccaaaccacattttatagcaatgacatg
tctgaaaatctggaggtgtcaaaggtgacagaaactttattgaacaaccctggttttggg
acacgttgtatgcatggagatccaataccaggcttaccgtgttcgccaacttactctgat
tggactattccatctgtggatcagtcaatcaaagacatcttcctcaacgggaactggagc
atggctaatccttcgccttcctgccaatgcagcactcctaaacggacgattatgttaccc
gactgtccaccaggagcgggaggtctccctccaccacagagagtacagaacacaacagaa
actctgctggatttaactggacggaacatgacagacttcttgatcaagacttttgaggac
tccggaaaaaaaaggtatggaggtatttctgtgggagcagtcaactcacaagtccgtcta
tctgaggcagaggtcgaagatgtcttcagggatttgaaaaatcttttgagttcatctcag
gataacgtcactgatcagaccctgcagagagccgagacggtgctgaagaagcttggaacc
agggacaatgtcaaggtgtggttctacaatcaggcatggcatggcatggtgtccttcctt
agtgtggccaacaatggcatcctgagaggaaatcttcccaagggagaggaaccacgccac
catggcatctccgtttctaatcaccccctaaatctcaccaaggagcagctctcctccgca
gccatggcgacgacctctacagacgtggtggtgtccatctgtgttattttcgccatgtcc
ttcatccctgccagcttcgtcctctttctaatccaggagagggtgagcaaagccaagcat
ctgcaatttgtcagcggtgtaaacccgaccgtctactggttaaccaatttcgtctgggat
atgtgcaactacatcgtgccctgcttcatcgtgattgtgatcttcctctgttttcaacaa
aaagcctacgtttcacctccgaatctgcccgctttgatactgctcctaattttttatgga
tgggccatcacacccatgatgtatccagcctccttcatcttcagcgttcccagcacggct
tacgtggtgttgacctgcgtcaacctcttcattggcatcaatggcagtgtggccaccttc
atcatggagctcattgaagatgataacatatctcgcattaatgacatagtgaagcaggtg
cttctgatattcccacatttctgtctgggcagaggtcttattgacatggccaagaaccag
gcaatggcaactcttttcatcaattttggggaagatcgttttaagaatccactgagctgg
gagatggtgggaaaaaatctccttgccatgtctattcaaggaagtgtgatgttcctcact
accattctcatccagtacaagttcttctgcaaaccgaggcttatatcaccaaagcagtcg
gctacagaggaggaggacgttgacgttgcccgggaacgccagagagtgtgtgaaggcaga
gctcagaacgacctgttgaggatcagtaacctcacaaaggtataccctgggaagagcacc
cctgctgtggaccagctatgcgtgggcgtgcctgcttcagagtgtttcggcttgctgggg
atcaacggcgctgggaaaaccacgacattcaagatgctgacgggagacatcccagtctcc
agcggagaggcctttctaaacggatacagcatacggacagaaatgagacatgttcaccag
aacatgggttactgtccccagtttgacgccattgatgaccttttgactggacgagagcat
ctggagttttatgctcgactaagaggggtaccagaagcagaggttgccatggtggccgaa
tgggggattcagaagttggggctgatcaagtacgccaacaagtcagcaggaacctacagc
ggtgggaacaaacgtaaactttccacagcgatggccttgatcgggtgtccgccagtggtt
ttcttggatgagccaaccaccgggatggaccccaaagccagacgcttcctttgggactgc
atcctgagtgtcatcaaagagggacgctcagtcattctcacatcgcacagcatggaggag
tgtgaagcactgtgcactcgcatggccatcatggtaaatggtcgcttcaaatgccttgga
agcatccagcatctgaaaagcagatttggtgatggctacacggtgatcgtgcgtgtcggc
ggctcccctcctgccctcaaaccagtcgaggactttgtccagctgactttcccagacagc
gttctcaaggagaaacaccacaacacactccagtaccaactcccatacacacagggagct
ttggccagcatcttcagccacttcaccagcaatcagcacaggctgggcgtggaggactac
tctgtgtcccagacaactctggatcaggtctttgtgaactttgcacgccaccagcatggg
gaggatgactctcaggcctacagcaacccagtcgacgtcacagacgagctgccaatgagg
tcactgcgggcctcccgggaagcggagaacgcctaa
DBGET
integrated database retrieval system
