Xiphophorus couchianus (Monterrey platyfish): 114157596
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Entry
114157596 CDS
T05908
Name
(RefSeq) uncharacterized protein LOC114157596 isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114157596
03036 Chromosome and associated proteins [BR:
xco03036
]
114157596
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114157596
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114157596
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114157596
UBL E3 ligases
114157596
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
114157596
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114157596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
PWI
Motif
Other DBs
NCBI-GeneID:
114157596
NCBI-ProteinID:
XP_027894490
LinkDB
All DBs
Position
14:complement(24686489..24693919)
Genome browser
AA seq
1403 aa
AA seq
DB search
MPLPARRRRKKGPDEEERAAGFSAEVMAPTRMKLRRRDTAPAAAPAGGTLEGDADRTRES
RRSSRRKNGSKASAPAAPASSPPSTSSGAARPAVAAEASPDSKCPICLDRFNNLAYLDHC
LHRFCFPCIQEWSHNKAECPLCKQPFASILHSVRAEDDFKEYTLQPPPRAANQLTASTFL
TTVAAMTADGAQHHLRLMLRRHLVAADRDAVRRRRRRERAASGRRSTDRVGEWEFFMHSP
PLPVSPYHLDMSELIMDNMRVEEVAEEMMRRDEERRQALSEELAGLRGAAAPSARASRRL
MCRLAVRQRLQREGGTVQMREREVAAFRKALYQSGIWVRGVSGNQGRPRSVAPETFRRGT
SHLNRLTSWLRRELAVLLGPHAPLSDVVLRTVTARVLRSGLEDAAAIEEDLRPFLLARTE
HFVHELVSFARSSLSMENYDQLAVYEPPAAAMELEPLSSPSDGSSVIAISEDEEEEGGGR
AEAATGSHDDVIQTGSSLSLSGWDDETPGPSYTSAEPPHSLTTPPPLSPAPQQPANQEGA
EPRGEEEECLIVGYKKPIAERTPELVQLSSDSEEDEGEKKKKEEQEVEVGSATVDKTPPP
PATYLPIIPPSTSGAFRAEQQKEANSRRRSGSWSESSGRSRKSVCSLSPATPERRRRDRK
QQGERRRKKKKQRGRDQSREPHGKSGTFCNPNRSIFPPMMSRCSPSPFDSSADSASSPPP
SPPDSGWELRFSQVSPLTSSASSPSRSFSPLCSSPGTPPSPSCSPKRPHHVEKPGGKRKY
KSRHLNSSKDLTWRPSRGRQCDRERRKRLRREAERRDNGLKTGSSRRSRDDRSPSVEIIY
EGTIDSGAAQPSAHKRRRRRHRRAQVTSSPVIITLDSDSSHDDGQKKTNSGSSSPLSSQQ
TIDFSDLPLAPSAGVGGAVEVGELPADILDRGSDGSESEAPVRSGAARRGDGGYVDVENM
EDTVSLLDTSDDQQPEADAKKLGHREDPSDRCLLEAILDDLNRIAPPRQNLSQDGGFLSK
NRERTPQEVIRLEERTGSGPTSVTGCQQNLDSVPPPLERMEGREVPPLLRRASPVGSYSR
NTPPPLKHKDAGSPPRGAAGPPDVGPRCSSDPNTTGRNSPGLVPLAIPPIATIQNQLGVS
PTASGEALASSSPRLPVRSGSDRLPSLRFGSFPSMESFPSSKSLKLNLPLTPATSSHSSD
LHPAHHRNPVSPTRRVGAGGLGPSGWMVHLAGVQTFSGLNSLSAAAFRPDRPPAGGVRPD
LTAAARGQEVGVSDSASNHKALAPPPSQHALCFIQSEHSSQSKSHSEPIHLSESDSASKN
RNNPSSTAPPGSQGQNQHQSSQATPPSTHPHDSAHRRSSSRLSDPAHLLSGSAPKSSHRT
FEPSSDNQPLGRPSDRLSGEIPP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccggcgcggagaagaaggaagaaaggcccggatgaggaggagcgagctgcg
ggtttttcagctgaggtgatggcgccgactcggatgaagctgcgccggcgagacacggcg
cctgcagccgctccagcaggaggcactctggagggagacgcagacagaaccagagagagc
cggcggagcagcaggaggaagaacggcagcaaagcctcggcccccgctgcccccgcctca
tctcctccctccacctcgtccggcgccgcgaggcccgccgtggcagccgaggcgtccccc
gactccaagtgtcccatctgcctggaccgcttcaataacctggcgtacctggaccactgc
ctgcaccgcttctgcttcccctgcatccaggagtggtcgcacaacaaggcggagtgtccg
ctctgcaagcagcccttcgcctccatcttgcactcggtgcgcgccgaggacgactttaag
gagtacacgctgcagccgccgccacgcgccgccaaccagctcaccgctagcaccttcctc
accaccgtggctgccatgacggcggacggcgcgcagcaccaccttcggctgatgctgagg
cggcacctggtggcggccgacagggacgccgtgcggcggcggcgcaggcgtgagcgggcg
gcgagcggtcgcaggtcgaccgaccgcgtcggggagtgggagtttttcatgcactctccg
ccgctgcccgtctcgccgtaccacctggacatgtcggagctcatcatggacaacatgcgg
gtggaggaggttgccgaggagatgatgaggagagacgaggagcggcggcaggcgctgagc
gaggagctggccggcctgcggggcgcggcggcccccagcgcccgcgcgtcacgccgcctc
atgtgccgcctggcggtccggcagcggctgcagcgggagggcggcaccgtccagatgagg
gagagggaggtcgcggcgttccgcaaggcgctctaccagagcgggatctgggtgcggggc
gtcagcggtaaccaggggcgacctcgtagtgtcgctccggagacgttccgccgggggacc
agccacctgaaccggctgaccagctggctgcggcgggagctggcggtgctgcttggcccg
cacgccccgctcagcgacgtggtgctgcgcaccgtcaccgcccgcgtcctgcgcagcggc
ctggaggacgccgccgccatagaagaagacctgcggccgttcctattggcccgtacagag
cactttgtgcacgagctggtgagcttcgcccgctcctcgcttagcatggagaactacgac
cagctggctgtgtacgagccgcctgccgccgccatggagctggagccgctcagcagcccc
tccgacggcagctccgtcatcgccatctctgaggatgaggaagaggagggaggaggaaga
gccgaggcagcgacaggaagtcacgatgatgtaattcaaacaggaagcagcctcagcctg
tccggctgggacgatgagacgccaggaccgtcgtacacctcggcagagccgccacattca
ctcaccacgccgccgccgctcagcccggcacctcagcagccggccaatcaggagggagca
gagccgcgcggcgaggaggaggagtgtctgatcgtcggatacaagaagccgatcgctgag
agaactccagagctggtgcagctgtcctccgacagcgaggaagacgagggagagaagaag
aagaaggaggagcaggaagtggaagttggctcagcaacggtcgataagactccaccccct
cccgctacctaccttcccataatccctccctccacgtcaggagccttcagggcagagcag
cagaaggaggcgaactcccggcggcggtctggttcctggtcagagagttctggacggagc
aggaagtcggtctgctccctcagcccagcgacgccggagcgccgccggagggacaggaag
cagcaaggcgaacgccggaggaagaagaagaagcagcgtgggcgggaccagagcagagag
cctcatgggaagagcggcaccttctgcaaccccaaccgctccatcttcccccccatgatg
tcccgctgctcgccgtcgccattcgactccagcgctgactccgcctcctcgccgccgccg
agcccgccggactccggctgggagctccgcttcagccaggtgtcccccctcacctcctcc
gcctcctcgccctcccgctccttctccccgctctgctcctccccgggaacgccgccctcc
ccctcttgctcccccaagcgcccgcatcacgtggagaaacccggcgggaagaggaagtac
aagagccgccacctgaacagcagcaaggacctgacatggaggccgagccgcggccggcag
tgcgacagggagcgcaggaagaggctccgcagggaggcggagaggcgggacaacggcctg
aagacaggaagcagcaggaggtccagagacgaccgcagtcccagcgtggagatcatctac
gagggaaccatcgactccggcgctgctcagccgtctgctcacaagcgccgccggagacgc
caccgcagggcgcaggtcaccagctctccggtcatcatcaccctggacagtgacagtagc
catgacgacggccagaagaagaccaacagcggcagcagcagccccctcagcagccagcag
accatcgacttctccgacctcccgttggctccctccgccggagtgggcggggccgtggag
gtgggggagcttcccgccgacatcctggaccgggggtccgacgggtcggagtcggaggcg
ccggttcggtccggagcggcgcgccgaggcgacggcggctacgtggacgtcgagaacatg
gaggacaccgtgtctctgctggacacgtctgacgaccagcaaccggaggccgacgccaag
aaactgggccacagagaagacccttctgaccggtgcctgctggaggccatcctggacgac
ctgaaccggatcgctccaccaagacagaacctgtcccaggatggcggcttcctgtcgaag
aacagagagcggacgccgcaggaagtcatccggctggaggagaggacaggttccggtcca
acgtctgtcaccggctgtcagcagaacttggactccgtcccgcctccgctggagaggatg
gagggtcgggaagtcccgcctctcctccggcgggccagtccggtcgggtcatacagcagg
aacacgccgccgcctctcaaacacaaggatgctgggagtccgccgcgcggcgccgccggc
ccgccagacgttgggccacgttgttcctccgacccgaatacgactggcaggaactcaccg
ggtctcgtcccactcgccattcctcccatagcaacgatccagaaccagctcggcgtgtct
ccgactgccagcggcgaagcgctcgcctcctcctcccccaggctcccggtccggtccggt
tctgatcggctccccagcctgaggttcggttcttttccctccatggagtcgttccccagc
agcaaaagcttgaagctgaatttacctttgacccctgcgacctcctcacattcctcggat
ctccacccggctcaccacaggaacccggtcagcccgactcgtcgggtcggtgctggtggt
ctcggtccatctggctggatggtccatctggctggagttcagaccttctcaggtctgaac
tctctcagcgctgctgctttccgaccggaccggccgccagcagggggcgtccgtcctgac
ctcaccgccgctgcaagaggtcaggaggtcggcgtctctgactccgcctccaaccacaag
gccttagctccgcctccatcacaacacgccctctgcttcatccaatcagagcacagttct
cagtccaagtcccattctgaaccgattcacctctcagagtccgactcggcatcaaagaac
cggaacaatccgagctccacagccccgccgggctcacagggccagaaccaacatcagagt
tcgcaggctacgccacccagcacacacccacatgactccgcccaccgacgatcttccagc
cgactctctgaccccgcccacctcctctctggctccgcccctaaatcctcccacaggacc
tttgaaccttcgtcagacaatcagccgttgggtcggccgtctgatcggctctctggagaa
attcctccctga
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integrated database retrieval system
