Xiphophorus couchianus (Monterrey platyfish): 114158014
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Entry
114158014 CDS
T05908
Symbol
gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114158014 (gigyf1)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114158014 (gigyf1)
Surveillance factors
Other surveillance factors
114158014 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF6033
Motif
Other DBs
NCBI-GeneID:
114158014
NCBI-ProteinID:
XP_027895121
LinkDB
All DBs
Position
14:complement(19067744..19101019)
Genome browser
AA seq
1064 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSAAVLRLMGKGVGGPAPAGVVRGRG
AARGGRGRGRGEGGFYQRSIEDTEVGFGRNVREIHRSQSWDDRGERRFEKPLRREVGRPS
FEESSGPVGPVRKEYTRADSDNWRTLREEQEEDEGEPGTNWRLSGSRRDDGGPRSAGWRD
HSGPGEGRRRKFDFDFRDSEGHGAGRRRAGSEGLEDDRDGLPEWCTDEEDGEMGTFDSSG
AFMPLKKGGKETILEEDLDFKGIEDEDEDDGFLDAERNNGDGDKDKEIKDLLPAAGEEKM
KPAPPSSSSSSPPAHCAPPSLELQPGSAGQLMENSQMNNSHSVKAGSASADDLASVGGSK
SQLSPSVAIGNASTSSNLPPPPSSSAAPLLPPSGGDPEDDEGLKHLQQEAEKMVASLQDT
SMEEECFTHSLQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYF
TMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQRSQTSRGSSGTGN
LDQERLKKQQELATAALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVPDTGPLWDMHTS
ASQSSGGEASLWDLTMNPNTQGPTLEQLQKLQERRDAELRAKREEEEQRKRREEKRRQQQ
EEQKRREEEELYRRKQRQQQELLMKLLQQQSPQQQGSAVGGSGWSSAPSSGLSKAGKSLT
MLEMQEAERILKQQQRAQQQRHPGLSMGSSSMGGQWADGVGMWGGLEGKGGSGGSSSSMG
MWDEAVKNQAGLRGNTNNNLGLKNSRSSPSLTDQYMMRRKRTEDEEKLLKLLQGMKPQDG
FTTWCEQMLHALNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAK
QFLERRAKQKANQQRQQQQLSKEVGGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKAGLY
DNQGGKMKKKPPMMLHSDPSILGYSFHNTGECLSMNEMEMVEDY
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactctaaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccccgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattttgcaagatgagcccatgcagcctctggcactggtg
cctctcaccgaggaggagcagaggaacttctccatgtccgtgaacagcgcggcagtgctg
aggctcatgggaaagggagttggagggccagcacccgccggagtcgtccgtggacgaggg
gccgctcgaggtgggcgaggccgaggccgcggcgaagggggattctaccaaagaagtatt
gaggacaccgaggtgggatttggtcgcaacgtccgagagattcaccgcagccagagctgg
gacgaccggggcgagcgacggtttgagaagccgctgcggcgggaggtggggcggcccagt
ttcgaagaaagcagcggtcccgtgggtcccgtgaggaaggagtacacaagggctgacagc
gacaactggcgcacgctccgtgaggagcaggaagaggacgagggcgagccgggaaccaac
tggaggctctctggatcccgcagggacgatggtggtcctcgctcagcgggctggcgggac
cacagcggtccaggtgaaggtcggcgaagaaagtttgattttgacttccgggactcggag
ggtcacggcgctggccgccgtcgcgcaggaagcgagggattggaggacgaccgggacggc
ctgccggagtggtgcacggatgaggaggacggagagatggggacgttcgactcctctgga
gcgttcatgcccttaaagaagggtggtaaggagacaatcctggaggaagatttggacttt
aagggcatcgaggacgaggatgaggacgacggcttccttgatgcagagaggaacaatgga
gacggagataaagacaaggagattaaagacctccttcctgctgcaggggaagaaaagatg
aagccagcaccaccctcctcttcctcctcctcccccccagcccactgtgccccgccatca
ctggagctccaaccaggaagtgctggtcagttgatggagaactctcagatgaacaacagc
cactctgtcaaggccggcagcgcctctgctgatgacctggcctcggtggggggctccaag
tcccagctcagccccagcgtcgccatcggcaacgcctccacctcctccaacctacctccc
ccaccctcctcctctgctgctccgctcctccctccttctggaggagaccccgaggacgat
gaaggcctgaaacacttgcaacaggaggcagagaagatggtggcgtcgctgcaggacacg
tccatggaggaggaatgcttcacgcattctctgcagcagcaggagagccggaacacagcg
gctgctctgccgctgtctcacgaagccgccatgaagtggttctacaaagacccgcaggga
gagatccaggggccgttcaccacggtggagatgtgcgagtggttccaggccggctacttt
accatgacgctgctggtgaagcggggctgcgacgagggcttccagcccctgggggacgtc
atcaagatgtggggccgcgtgccctttgcccccgggccctcgccaccgccgctgctggtg
aggcagctcccgccaacgcagcgatcgcagaccagccggggatcctctgggacggggaac
ctggaccaggagcggctaaagaagcagcaggagctggcgacggcagctctctatcagcag
ctccagcagcagcagctattccagctcattaacaggtgcagtgagcagggtatgatgcct
tcgatgaaccggtcgatgtcagtgccagatacagggcccttgtgggacatgcatacctca
gcttcacagtcgtcaggcggtgaagccagtctttgggacttaacaatgaatcctaatact
cagggtccaactcttgaacagcttcagaagctccaggagaggcgagacgccgaactcagg
gcgaagcgcgaggaggaggagcagcgcaagaggagggaggagaagaggaggcagcagcag
gaggagcagaaacggagggaggaggaggagctctacagacgcaagcagcgtcagcagcag
gaactgctcatgaagctgctgcagcagcagtcgccccagcagcagggatctgcagtgggg
ggctcagggtggagcagtgcgccctcttctggcctctctaaggcagggaagtccctgacc
atgctggagatgcaggaggctgagcgcatcttaaagcagcagcagcgagcgcagcagcag
aggcatcctgggctgtccatggggagttcctccatgggcgggcagtgggccgacggcgtg
ggcatgtggggcggtctggaggggaagggaggaagcggcggctcctccagcagcatgggg
atgtgggacgaggcggtgaagaaccaggccggcctgcgggggaacaccaacaacaacctg
ggcctgaagaacagccgcagcagcccctctctgaccgaccagtacatgatgcgtcgtaag
agaacggaggacgaggagaagctgctgaagctgctgcagggcatgaagcctcaggacggc
ttcaccacctggtgtgaacagatgctgcacgctctcaacacctctgccaacaactcctct
tcctctctggatgtcgccaccatcgtggcgtacctgaaggaggtggagtctccctatgca
gtgctggatttcatccggtcctaccttggggacacagtggaagccaaagagttcgccaaa
cagtttctggagcgacgtgccaaacagaaagccaaccaacagagacagcagcaacagcta
tcaaaagaagtgggtgggttgaacatgaacttccctctgcaggactcaatgcgaggtatg
aatccaagcactctgcagtccatgtttcaggccaaccacatgggcaaagctggtctctat
gacaaccagggaggaaagatgaagaagaagccacccatgatgctgcactctgatcccagc
atcttagggtactcatttcacaacacaggcgaatgtctgagcatgaatgagatggagatg
gtggaggattactga
DBGET
integrated database retrieval system
