Xiphophorus couchianus (Monterrey platyfish): 114158217
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Entry
114158217 CDS
T05908
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114158217 (dtl)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114158217 (dtl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
MIOS_WD40
Beta-prop_Nup120_160
WD_LRWD1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
114158217
NCBI-ProteinID:
XP_027895354
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All DBs
Position
15:complement(7943224..7952349)
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AA seq
649 aa
AA seq
DB search
MFFHSIVDRGVGRRRQNAFPADLCSKIPLGSLLESYQCTRHDEHISYGNTGDTVPPFGLA
FSTAGNMPNVLAAANEEGIVRIYNTESRENPLLKEWLAHENAVFDIAWVPREPQLVTAAG
DQMARLWDVKSGELLGGFKGHLCSLKSVAFAPGEKAVFCTGGRDGNIMVWDIRCSQKDGF
YKQVKQISGAHNKSETNSSSKVKKKRSSMRGMAPSVDTKQSVTVVLFRDQHTLISSGAVD
GVIKMWDLRKNYTAYHRDPVPMQSYPYAGSSTRMRLGYSGLVLDSTRSNIMCNCTDDNIY
MFSVCGIKTNPVAVFSGHQNSSFYIKSTISPDDQFLASGSSDNYTYIWKISDPQHPPVML
HGHSEEVTSVVWCPTDFTKIASCSDDHTIRVWRLRRETDGTQSPVGEANLIGWARPKSPT
MPLARAATSPVNTQKTPSLGGLASPQLAACAPNRAALPLPSSTTSPSSFVPLPAQQRTSS
IQQWLSPIHGSQSRVNATTPPHQVLRPCPLSPASGASPTQRRAKRRLETGESSPCSCVDA
AQCECVSELNPASKRSHVLSDVHCLAQESAVERDCHADDSEPVTSRQAGKENWFPRAGNW
LSEMGQKMKKSQGGPSAHKKQEEKTPTSAIHRSPKTKKISTYFAKGPQE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccactctattgttgacagaggagtggggagacggaggcagaacgccttccct
gcagatctgtgttccaagatccctttgggctcgctgctggaaagctaccagtgcacccgg
catgacgagcacatctcctacggcaacacaggagacacagtgccgccatttgggctggct
ttctccactgctggaaacatgcccaacgtcctcgcagcagctaacgaagaaggcattgtt
aggatctataacacagaaagtcgtgaaaaccctcttcttaaagaatggctggctcacgag
aacgccgtctttgacattgcgtgggtgccgagggaacctcagctggtgactgctgcaggg
gaccagatggccagactgtgggatgtgaagtctggggaactgctgggaggctttaaaggc
cacctctgcagcctcaagtcggttgcatttgcaccaggagagaaagctgttttctgcact
gggggcagagatggaaatattatggtctgggatatcaggtgcagccaaaaagatggtttt
tacaagcaggtgaaacagatcagtggcgctcataacaaatctgagacaaattcctcatct
aaagtgaagaaaaaaaggagcagcatgcgtggcatggctccgagcgtggataccaagcaa
agtgttacagtggtgttatttcgggatcagcacacactcatctcttcgggtgctgttgac
ggtgttataaagatgtgggatttgaggaagaactacacagcttaccatcgtgaccctgtg
cctatgcagagctatccatatgctggttcttccactcggatgagactgggctactctgga
cttgttctggactctaccaggtccaacatcatgtgtaactgcacagatgacaacatttac
atgttcagtgtctgtggaataaagacgaatccagtggccgttttcagtggacaccagaac
tcctcgttctatatcaagtccacgatcagccctgatgaccagttcttggccagtggatcc
agtgacaattacacctatatttggaagatctccgatcctcagcatcctcccgtgatgctc
catggacacagtgaggaagtgacctctgtcgtgtggtgtccgacagatttcactaaaatt
gcttcctgctccgacgaccacaccatacgggtctggaggcttcgtcgggaaacggatggc
acacagtcaccagtgggtgaagccaacctcataggctgggcacgtcccaaatctcccaca
atgcctttagccagagctgcaacgtcccctgtgaatacccagaagacgccaagtctcggc
ggcctcgcctcgccacagctcgctgcctgtgcccctaacagagccgccctgccactacct
tccagcaccacgtcgccgagcagctttgtcccacttcccgctcagcagagaacatcttct
atccagcagtggttatccccgatccatggatctcagagtcgggtcaacgccactactcca
ccacaccaagtgctgaggccgtgtcctctgagcccagcgagtggcgcctctcccacgcag
cgacgggccaaacgcagattggaaacaggtgaaagttcaccttgcagctgcgtggacgca
gcacaatgcgagtgtgtttcagaactcaaccctgcatctaaaaggagccacgtcctgtct
gatgtacactgcctcgctcaggagagcgcagtagagagagactgtcacgcagacgacagc
gaaccagttacctccaggcaggctgggaaggagaactggtttcctagagcaggaaactgg
ttgtcagaaatgggtcaaaaaatgaaaaaaagtcaaggtggtcctagtgcacataagaaa
caagaggagaagacaccaacctcagcaattcatcggtcaccaaaaaccaagaaaatctcc
acatattttgcaaaagggcctcaggaatga
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