Xiphophorus couchianus (Monterrey platyfish): 114158332
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Entry
114158332 CDS
T05908
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114158332
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114158332
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
ig
Ig_2
LRR_9
LRR_14
fn3
Sp38
DHU1_N
LRR_EndoS
C2-set_2
Ig_DSCAM-DSCAML_C
LRR_Zer-1
LRRCT_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
114158332
NCBI-ProteinID:
XP_027895504
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Position
15:15970121..15995888
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AA seq
801 aa
AA seq
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MESFLVYLIILGVAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPYAFRDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHSGAFNDLTALEELDLSYNNLESAPWIAIQRMSNLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPLSFALSF
GGNPLRCNCELLWLRRLQREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELH
ALEGQSVTLRCKARGDPDPIIHWIAPDARLMSNSSRAVVHTDGTLEILISTVKDSGSFTC
VASNPAGEAHQTVDLLIAKLPHITNDTIAEQEPDPGSSDIATVTKTGAEAGGVPLGNAKT
SQEKKVVVAEATSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNILVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCSQGDADKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRPE
KNDKECARVALPPPEPTKQRPPVSVPTTKPSVPDCMVSTSAGSHSWHPASPGAPRPKRSG
APPKPSEGRRAEAQTDVELNNMNRNNSSEVKTATAVSTAPPGPGQPQKWTAAPRVPRPHQ
TSRHYMTVPAGAVRVNRRHSLNADSSYRERCYVAYPKVGAGLRSKRSLSMSGELPQLEST
TNIHRARGKLSRSEWLLESTL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcctggtctacctgatcatcctcggcgtggctgtgaaggcgcacaaggtc
cagatctgccccaaacgctgcgtctgccagatgctgaaccctaacctggcgacgttgtgt
gacaaaaaggggcttctgttcgtgccccccaacatcgacaggcacacggtggagatgcgg
ctcggcgataacttcgtcaccagcattaagcgcaaggactttgccaatatgaccaagctg
gtggacctgaccctctctcgcaacaccattgggtccattgcaccgtatgccttcagagac
ctggagaacctccgagctcttcacctggacagcaaccgactgacccgcatcaccaatgac
accttcagcggcatgtccaagctgcaccacctcattctcaacaataaccagctcacccac
atccacagtggggccttcaacgacctaacagcgctggaagagctggacttatcctacaac
aacttggaaagcgccccatggatagccattcagaggatgtccaacctccatacgctcaac
ctggatcacaacatgctcagcctgattccagagggcactttctctgggctgcagaagctt
aagaggctggacgtaacctccaacaagctgcagaaactccctcctgaccccgttttccaa
agagccggggtcctggcgacgtccggcataatggggcccttgtcattcgcgttgagcttt
ggcggcaacccgttgaggtgcaactgcgagctgctgtggctgcggaggctgcagagggag
gatgatctggagacctgcgcttccccacaacacctagctgggcgttatttctggactgtt
tcagaggaagagttcctgtgtgagccgcctcttatcaccagacactctcaggagctgcat
gctttagagggccagagcgtgactctgcgctgcaaagccaggggcgacccggaccccatc
atccactggatcgcgccggacgcgcggctcatgtccaactcttccagagccgtggtccac
acagacggcacgctggaaatcctcatcagcaccgtcaaggactcaggttccttcacctgc
gtggcctccaacccggccggagaggcccaccagacggtggatctgctcatcgctaaactc
cctcacatcaccaacgacacgatcgcggagcaagagcccgaccccggatcgtcagatatc
gccacggtgaccaagacgggagccgaggcgggaggggtgcctctggggaacgcgaagacg
agccaggagaagaaagtggtggtagccgaggccacctccacctcggccctggtgaagttc
aacttccacaggagcatccctggaatccgcatgtttcagatccagtacaacggcacatac
gatgactcgctggtgtacagaatgatccccccaaccagcaagaacattctggtgaacaac
ttggcggctggcacgcaatacgatctatgtgtcctggccatctacgacgaccaggtcacc
tcgctgaccgccaccagggtgataggctgcatccacttcaccaccgagccgcagtatctg
cggtgccacttcatgcagtcgcagttcctcggcgggaccatcgtggtcatcattggaggg
attatcgtggcgtccgtgctcgccttcatcatcttcctcattgtgcgttaccgagtgtgt
agccaaggggatgcagacaaggccctggagatgggggatatccgatcactgagcagcgat
ggacagctacagggctgtggcatccccaagtccctctctaaacaggtcctccgtccagag
aagaatgacaaggaatgcgccagagtcgccctcccacctccggagccaaccaagcaacga
cctcccgtctcggtgcccaccacaaaaccttctgttcctgactgcatggtgtctacctct
gctggcagtcatagctggcacccggcctccccaggagcgccgaggcccaagcgttccggc
gctccaccgaaaccctcggagggccggcgagctgaagctcagacggacgttgagctcaac
aacatgaaccgcaataactcttcggaggtcaaaacagccactgccgtctccaccgctccc
ccagggcccggccaaccccagaaatggactgctgctccgagagtcccgcgaccccaccaa
acctcccgacattacatgactgttcctgcaggagcggtgagagtgaaccgccggcactcg
cttaacgcagactcatcgtacagggagcgctgctacgtagcctaccccaaagtcggggct
ggcctgcgctccaagcgcagcctgtcaatgagcggagagcttccccagctcgagagcaca
acaaacattcatcgagccaggggcaaactatccaggtctgagtggctgctggagagcact
ttatga
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