Xiphophorus couchianus (Monterrey platyfish): 114158360
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Entry
114158360 CDS
T05908
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114158360 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
Tubby family proteins
114158360 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_ELP1_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
114158360
NCBI-ProteinID:
XP_027895552
LinkDB
All DBs
Position
15:9659654..9684062
Genome browser
AA seq
1736 aa
AA seq
DB search
MFASVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNSRGVVGVTFT
SSHCRRDRATPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVGMSWNYPSFLVEDSSESDTDSDDYTPP
KVHSQKPLLTVSFTSGDISLMNSYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERTVL
LSPDAPCSPPTKNAIVKFYNVRGDHIYTLDTPAQRPITTLCWGHRDSRLFLASGPALYAV
RVDHRVAALQLLCQQVIATAVKEEKDVAKLTMPSRLCTYVTAAFAPTIKPPIPDPNNMRD
FVSYPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMD
PKTDGKTDEIYSNSLISAMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRINID
PRKSPKLSRTTQEISRSPRLPLRKPSIGSPSLSRREFPLDDINQQNYLAQVTSNIWGTKF
KIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMEYINLPVFSPNVFSEDED
DLPVSGPAGSTDENPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNVQLDVLSNTT
AAPSGSLSSGSDQTQDAILTTQYTVPTRYSSPGQVIFGGLDVGRLMVGPPPTHHPSQQQQ
QSQQQLLQHQQIQHHQQQQQQILQQHHLQQQQHIQQQLQQQLQQHIQMQQHQQMQLQQQQ
QMHHQLQSQQHHLQQQLQIQIPAPSLSPGQPSGTALHQLQPGALQIQIPHQPADLVVDRT
AGGEHEHLLKIKTTRSTPQLADADTVVFSAPLELSKMNPPPPYPGTVAAAVAAAAAAASP
SASSSSSGTEGGASGTPPPSELCVKKGDFKLYPPGQQQLQYPTPLGYERITTFDSSGNVE
EVCRPRTRLVCNQNVYTLQGPGNSATLRVTSSSSSSAADKKIQLPYTSATLNRLTAPRYS
IPSGDPPPYPDSANQSGAAGRNPNQRLDSSLIHATLRRNSREAALKVSQMLEPPRPLPPK
AKNSPLATSFQQRVPTALYTCSQCSSGSSVGGSAPGSANGIAGGTIIRQDFPPGNGAPHS
TVIVHSSSAAALASQSSYSLMSSLEGSGSAAGAGGNRDRAEYVNSAFTEDETLNQSLRHL
VIGGNDASGLVVKRPPPYQWDPTGTEEVWIPQERTANVPPGAHKPPPLILSPTQHLDVTR
LPFVLSPKSPTSPSAASFQAAAAAATATGYQISLQYPPAAAYAGAQLQPIPGSPRPCASP
KEVVAPVALSQQDATLVLSPGYSPNIANLACCPLPPLYPGGSSCAGIPIPPIALHTPWGT
YNPCPPMPSPAVPLPPKASHVSADKNVLSPPPPPPPQPPPPPADPQSHGALQETMAEPGD
AYQEVLSLTESPVPQRSEKFSKKNRKRMDSRAEEANVSQLAEGSKSKKEGRALGDFNSLI
SSPRLGGRDKKKLKGQKEQQMKTKKLSKATANSEFQDSSESEPELFISGDELLNQCQSGK
KGWKSKRNLRAASELDEIKCRKANEKEDRGLGSQGFVYVMANKQPLWNEATQVYQLDFGG
RVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttccgtggagcatggcccggtgctctgtagcgactccaacatcctgtgtctg
tcctggaagggccgagtgcccaagagtgagaaggagaagccggtgtgcaggaagcgctac
tatgaggagggctggctcgctaccgggaacagccggggggtcgtcggggtcacattcacg
tccagccactgcagacgggaccgggccacgccgcagagagtgaacttcaacctcagagga
cacaacagtgaggtggtattggtgcggtggaatgagcctttccagaaactggccacatgt
gacacagacggagggatttttgtatggattcagtacgagggccggtggtctgtggagctc
gtcaacgaccgtggagctcaggtgagtgacttcacctggtcgcatgatggaacgcaggct
ctcatttcataccgtgacggctttgtcctggtgggctctgtcagcggacagagacactgg
tcttctgagattaacttggaaagtcagattacctgtggaatctggactcctgatgaccag
caggtgttgttcggcacagcagatggacaggtcatagtcatggactgccacgggcgtatg
ttggcccatattctgctccatgagtccgatggcattgttggcatgtcatggaactacccc
agcttcctggtagaggacagtagtgagagtgacacagactccgatgattacactccaccc
aaagtgcacagccagaaaccactgctgacagtcagcttcacctctggagacatcagcctg
atgaatagttatgatgacctctcacccacactgatccgaaccggtttgaaagatgttgta
gtccagtggtgctctcagggtgaccttttggcagtggcagggatggagaggacagtcctc
ctctcccccgacgctccatgttctccacccaccaagaatgccattgtcaagttctacaat
gttagaggggatcacatctacacactagacacaccagcacagcgccccatcactacactc
tgttggggtcacagagactcgcgtctgttcttggcgtcaggcccggcgctttatgcagtt
cgagtggatcaccgggttgcggcgctacagcttctctgccagcaggtcatcgccacagcc
gtaaaggaggagaaagatgtcgccaagctcaccatgccttcccggctctgtacctacgtc
actgctgcttttgcccccaccatcaagccacccatcccagatcccaacaacatgcgggat
tttgtgagctacccgacatccgggaatgagagactgcactgtaccatgaagcgcacagag
gataacccggaggtgggcgggccatgctacactttgtacctggagtacttgggtggtctg
gtgcccatcctgaagggtcgacggattagtaagctgcgccctgagtttgtcattatggac
cccaaaacggatggtaaaacagatgagatatacagcaacagtctgatatcagccatgata
gacagctgtaactgctcagactccagtgatattgagctcaacgacgactgggttggcaag
aaatctccaaagatatctagaggaagcaaatctcctaaacttcccaggataaatattgac
cccagaaaatcacccaagctgtcccgaactacacaagaaatctctaggtcgccacggtta
cccttaagaaaaccctcgattggttcaccgagtctctcacggagagaattccctctggat
gacatcaatcagcaaaattacctcgctcaggtcacatccaatatttggggaacaaagttt
aagatagtgggactggctgcatttttacctaccaatctcggtgcagttatctataagacc
agcctcctccatctgcagcccagacaaatgaccatctacctgcctgaggtgcgcaaaatc
tccatggaatacatcaacctgcctgttttcagccccaatgtcttcagtgaggacgaggac
gaccttcctgtatcgggccctgcgggaagcactgacgaaaaccccccatgtactgtaaac
atccctattgcccccatccacagccctgcccaggccatgtcccctgcccaaagcatcggc
ctggtccagtctctgctagccaatcagaacgttcagcttgatgtcctcagtaatacgaca
gcagctccttctggatcattgtccagcggttcggaccaaacccaggatgccatcttgacg
acccagtacaccgtgcccaccaggtattctagtccgggtcaggtcatttttggggggctg
gacgtaggtcggctaatggttggaccaccgccgacccatcatccatcgcaacaacaacaa
cagagtcagcagcagcttctacaacatcaacaaattcagcaccaccaacagcagcagcag
caaatactccagcagcatcacctacagcagcagcagcacattcaacagcagctgcagcag
cagcttcagcaacatatacagatgcagcagcatcaacaaatgcagttgcagcaacagcag
caaatgcatcaccagctacagtctcaacagcaccatcttcagcagcagcttcagatccag
atccctgctccgtccctgtcaccggggcaaccttcaggaacggccctgcaccagctgcag
ccgggggccctgcagatacaaatcccccaccagccagccgatttagttgttgacagaaca
gcgggcggggagcacgaacacctgctgaagatcaaaaccactcgatcaacgccacagtta
gctgacgctgatacagttgtgttcagcgctcctttggagctcagcaaaatgaatccgcca
cctccttaccccgggactgtggccgcagcggttgccgctgctgcagctgcagcttcacca
tcagcttccagctcctcgtctggaacagaagggggcgctagtggtactcctccccctagc
gagctctgcgtgaagaagggtgacttcaaactttatcctccaggtcagcagcaactacag
taccccacgcctctgggctacgagaggataacgacgtttgacagcagtgggaacgtggaa
gaggtgtgtcgccctcgaacacgcctcgtctgcaaccagaatgtctacaccctccaggga
ccaggcaactctgccactctcagggtcacttcctcttcatcctcgtctgcagctgacaag
aaaatccagctgccctacacctctgctacgcttaacagactcaccgcaccccgctactcc
ataccaagcggagacccacccccataccctgattcggccaatcagagcggagctgctggg
aggaatccgaaccagcgactcgacagcagcttgatccatgccaccctcaggaggaacagc
cgagaggctgcgcttaaagtctcccagatgctggaaccgccaaggccacttcctccgaaa
gctaaaaacagtccactagcaacctccttccagcagagggtgccaacagccttatacacg
tgcagccagtgcagcagtggatcaagtgttggcggtagtgctccagggagcgctaatggg
atagcagggggaacgattatcaggcaagatttccctccagggaacggcgctccacacagc
acagtgatagttcactccagcagtgccgctgctctggcctcccagtcctcatacagcctg
atgagctcactggaggggtctgggagtgcagcgggagcaggagggaacagagaccgggct
gagtatgttaactcagcgtttactgaggatgaaacactcaaccagtcgctgaggcatttg
gtaattggaggaaatgatgcatctgggcttgtcgtcaaacgcccacctccctaccagtgg
gacccgactggcacagaggaggtgtggatacctcaagagaggacagcaaatgttccccct
ggagcgcacaagcctccgcccctcattctcagcccaactcagcacttggatgttaccaga
ctgccttttgttctttctccaaagtctcccaccagccccagcgctgcatcattccaggct
gcagcagcagcagctacagccacaggctaccaaatctctctgcagtaccccccagcagca
gcctatgccggagctcagctccaacccatcccagggtcgccgcgcccctgcgcctcccct
aaggaagttgtggcgcccgtggccctctcacagcaggatgcgaccctcgtcttgtcgccg
ggttactctccaaacatagcgaacctcgcctgctgtccccttcctcccttgtatcccgga
ggaagttcctgtgctggaatccccatccctcccattgcccttcacacaccgtggggaacg
tacaatccttgtccgcctatgcccagtcctgcagtgccacttccacccaaagcctcccac
gtgtcagcagacaaaaatgttctctcacctcctcctccacctcctccacagcctccacca
ccaccagcagacccacagagccacggggcgttacaggagacaatggcagagccaggggac
gcttaccaggaggtgttgtctttgactgagagccccgtaccacagcggtccgagaagttc
agcaagaagaaccgcaagcggatggacagccgggccgaagaggctaacgtgtctcagtta
gccgaaggcagcaagtcgaagaaagagggcagggctctgggggatttcaactcgctgatc
tccagcccccgactgggaggaagagacaagaagaaactgaaggggcagaaggagcagcaa
atgaaaacgaagaagctgagtaaggccacggccaacagtgagttccaggacagttcagaa
agcgagccggagcttttcatcagcggcgatgagctccttaatcagtgccagagcgggaaa
aaaggatggaaaagtaaaaggaacctgagggcagctagcgaacttgatgaaataaagtgc
cggaaagccaatgagaaggaagacagaggattgggcagccaagggtttgtgtatgtaatg
gccaacaagcagcctctgtggaatgaagccacacaggtctaccagctggactttggaggc
cgagtcacgcaagagtcggccaagaactttcaaatcgaactggagggccggcaggtgatg
cagtttggtaggattgatggtaatgcctacatcctggacttccagtaccccttctctgcg
gttcaggctttcgcagtggctttggccaacgtcacccaacgcctcaaatga
DBGET
integrated database retrieval system
