Xiphophorus couchianus (Monterrey platyfish): 114158395
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Entry
114158395 CDS
T05908
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114158395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114158395
03021 Transcription machinery [BR:
xco03021
]
114158395
03036 Chromosome and associated proteins [BR:
xco03036
]
114158395
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
ARID
114158395
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114158395
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114158395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114158395
NCBI-ProteinID:
XP_027895631
LinkDB
All DBs
Position
15:3751076..3773936
Genome browser
AA seq
1889 aa
AA seq
DB search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NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctgggatcagacagcaacagcagcaacaacaaccctcctccgactggg
accagctcccagtttaatcattattatgggaatggaagaggagggccttgctttgatcaa
catggcggacaacaaagcccagggactggggtaacagcggcggcacacacggtacacggc
accatggaccaggtccacaactcccacgaaggctacagcaacaacagcccgtacaaccac
tatccgaactaccgagcgggctacgggagcggtggctacgggggcatgatgagcccctca
cggcaggggaacagcctgatgggcccggccgccgctaacccagccaaagcggctatggtg
gccgccagttctccggctggaggaggcggaggaggattccagcggtttcccggacagggt
cagcagcacccttcgggggctacgccgactttgaaccagttattaacgtctccgagcccg
atgatgcgcggctacggaggcggatattcagattacagtaatcccgctgtacagcagcac
cagtcgggtgtggggccggcggaagacacgggctctcagtacggatcagcagcagcgcat
ggttgggggggacaacagaggagtcacccgggtcacaacggaccgagcagcggcagatct
caggtggcgccgatggacccgatggcgatgaagcgctctcagctttacgggatgagcaac
agcccgtactcccagcagcagggggcgccgtaccctggacaaccctacagctccccatcg
ccccacagataccccatgggaatgtctggcagggggcagatggcaatgggagggatgcag
taccctcagcagcagatgagctcccagtacggccagcagcagcaacagaacctgagcttc
agccagccaggccagtcgccgtacttcagcccctcccagcagcagccggccgcccccagc
cagccgccgtacctgcagccctgcccgctgccgccccaggaagttcctcaggaggcatac
ggggggcggggcaaatctgcagcaatgactcctgggaaattgaaccaggaggacttgagc
cagcaggagcggccgtccagtctgccggatctctcccgctccatcgatgacctcctgacc
agcactgaggcggcggtgagttcaggggcctccggttccggcagcgctcagggcgaccag
gggaccccgggggcccgctctcctttctccccccacgtttcgccacgtctcccccctctg
gcccgaacggttccctctccgtccccgtcgttgtcccctgctgggtcccgctcggggccc
ctgtcccccaccagcagcggtccaggcccccaggtgtctggatcagacgtcggcccccac
tcctcccagtcggccatgactccagaccgaggtttccctccctctatgcagcgtagcaac
caggggccacattttggccctttgtctccccacccagcatcggccggccccgggctccac
ggctcctaccagcagggctcctacggccccccaggtacctaccctcggccccctcactac
ggcgggacccctgctgccggctacagcggccccggctcgggccccagcctggctcacagc
atggggctgaacaccgccggccccatgcacgggcagggcccctccaccccgtcgggccga
ggtcccgggcccggagccgggggccgcccctacatgactgcatccggcaccgtggcgccc
acctcccccaacatgccgcaggctgccggccagggcatggggcccccaggggccaccgcc
agctgcaagccgccagacatgggcatcaactctggaccgaacgccaacgcctccctcagc
gctcacagcaggcagggcagctactcagctatggcagcgatgagagtttctggaggttct
ggaggttctggaggtccgttcagcagctcaggcaggatgacccctcagggcccgccttac
accgctccaggattagggatgatggcgtcagacgggacaggaagtcatgacctgaagcag
cgggtcgagctccgagacgccgtcggttctgctgctgatccaaccaaaatgaagcaggac
agctacagctcgcagtgtgtggtgccgccgcccggcgccgcctgcccgatgtcccccagc
ccggccagcgtgttgtcctgtgtgggagaagacagcgacagcgttggcagccccccctgg
atcaggaccccgtccagcccacagaagcccaacgtggcgaccatgaccaacgagaagatc
accaagctgtacgagatgggcagcgagccggaccgccgcctgtgggtcgaccgctacctg
gccttcatggaggacagggagacgcccgtcgccaacctgccggccgtcggcaagaagccg
ctggacctgtgccggctctacatggcggtgcgagcgatcggcggcctggccatggtgaac
aaaaacaagaagtggcgggagctgtcgtcgctgctgagcgtcgggacgtccagcagctcg
gccagctccctgaagaagcagtacatccagtacctgttcgcctacgagtgcaagatggag
cgaggggaggagcctccgcccgacactggcgccggggacgctaagaagcccctgcaggtc
aagggtcaaccgccctctcctgcgaattcaggctcgtttcagggccccaacacacccctg
tccagcagctcctccctcaccgacgctccagttgacccgaagtccccgacccgctcgtcc
accccgcacaaccagatggctccccagactggaaacaggaccatgggaggcgtgagcgtc
caggacccgttctccgaaggcagcgacccggccttccacagcaaacggggcccagggccc
tgcgggggcccctaccagcagggggcgggtccaacagaacccgcaatgagaatgcagtat
gacggcagcacagacccatatggagtcccgaggaaaggtccggttcccggcgaggccttc
ggtcagagccagatgcccggcggtgcgatgcaggacatgttcccccgcggaccctcctcc
ggccccctgtcagggttggggcccaggccgcagtacccctacggccccggctacgatcgc
agattggaccgtgtgatgggcccagagggaagcatggcgccccctggtggccagaacagc
atgggcccatctgccaatgaagccagcatgtatccccccaacagataccctcagcagagg
cacggacacgatggttttggtcagcagtatcctcacagtatggccttcggttcccatcag
cccctttacccccagcagcagggctacaagcgtccgatggaggccatgttcccggctgcg
aagcgtcatgagggcgaggcgttcggcgtgcagcagtacgggtcccagcagttggaccct
tttggcccctatggattcggaccgggggcgttttcaggccccgagcgccggcctgtcgcc
ggacagtaccagtacccatacggtcgggaccgccagggcctcccacagcacggcatgatg
ggatcggcccctgcggcagcggcggacggggggccgcagcccagcttgtggccccccagg
acagagatggggttctcgtacagccggcagggccaggggccccccttccccgatcaggag
ggccggcccccaccggacgcccagtggccccccagtaacctcaaccagtgtcaacctccc
tttccctcccactcttcttcctcctcctcttcctccatgcccccccttccctccaggcag
cccccctcctcttttcaggccacgcccaccatcccaaatcacgtgacccgcccccagagc
ccctcgtcattcccccggcctcctgtgggctccctgtcccccaatggcgccccctatctg
cccgttaagaaaccaggggtccccaccgttcccccagccaatcagggcctccccctcatt
tacagagaggtcgttttcccgcccggctctgtggaggccacaccccccaagctgaaaccg
cggcgacggctaacggcgaaggacacaggaacgccggaggcctggcgggtgatgatgtca
ctgaagtcggggctcctggcggagagcacctgggcactggacaccatcaacatcctgctg
tacgacgacggcacggtgggctcgttcagcctgacgctgctgcccgggttcctggagctc
atcgtggagttttatcgccgctgcctgatccagatgttcggcatcctgcaggagtacgag
atcggggccgagggcccgaaggcgacccccaaagacccgggggaggcgccgtcgccgctc
aacaaggaggatgccaagcctgaggattcccctcagcagagcagcaagtacgacaagtgg
ccagtcagggtggaggaggccggggagagctgggcggaggtggagcgccgggccgaccca
acccgaaccaacggcttcatcagcggtctgctgcactggaaggccggaggaggagactcc
acgactcacatccagacgcactttgagccccgatccagagacttcaggcccccagacccg
gagcaggagaagcagagcgaaggagtggaggagcagcgaacagaggaggagcagaagcag
actggtcatcaaggaggttctccatctgaggtcagaggtcagcgcccagcccctgctgag
gctcagaatcccatcagcctccaggaggacgagccgcgctgctgggacgaggcgccgctg
tccaccgccgagtcgtggcaggactccctggccagacgctgcatctgcatctccaacatc
atccgcagcctctccttcatccctggcaacgacgccgtcctgtcgcgccacccgggcctg
gttctgatcctgggccggctggtgctgctgcaccacagccacccgcgcaggaagcgggcg
ccgcccacctaccaacgggaggaggaagcgggccgggcctgcagccgcgacgagtggtgg
tgggactgcctggcggcgctgcgggagaatacgctggtgacgctggccaacgtgtcgggc
cagctggacctgtcgcagtaccccgaggacatcgtcctgccggtgctggacgggctgctg
cactggatggtctgtccgtccgccgaggcgcaggacccgttcagcggcgccgcggcgctg
tcgcctcagcggctcgtcctggagtgcctctgcaagctgagcgtccaggactgcaacgtg
gacctgctgctggccacgccccccttcagccgccagcagcagctcttcgccacgctggtg
cgcctggtgggcgagcgccgcagccaggtgtgccgggagatggcggtggccgtgctgtcc
aacctggcgcgcggcgacgccacggcggcccgggctgttgccctgcagaagggcagcgtg
ggaactctgatcggcttcctggaggacagcctggccgtggcgcagtaccagcagaacccg
cacgccgccgttccgccgccagagccgcccagcatcaacatgatgtgccgcgcggcgaag
gcgctgctggccgtggcgagcgtggaggagaaccgtcctgagttcgtcctgtacgagagc
cggctgctggacatctcgctgtcgtcggccctcaactcggcggtggcggccatcatgtgc
gaagtgctgttcaagctgagccgctcgtga
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