Xiphophorus couchianus (Monterrey platyfish): 114158459
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Entry
114158459 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114158459
04082 Neuroactive ligand signaling
114158459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114158459
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114158459
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
114158459
NCBI-ProteinID:
XP_027895759
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Position
15:22956377..22973706
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AA seq
498 aa
AA seq
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MPYNARVLLLLLLSLILMAESRRLGSRRKRWSEPGETLKPGKALGETPDAVVLVGKAGLE
AAMVNGPLSRKIIDGTKTRKLKTSHLLRVDEHDFTMRPAFAGPAVPVGVDVQVESLDSIS
EVDMDFTMTLYLRHYWKDERLAFPSATNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTT
TDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKS
GDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA
TLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF
VFVFLSVLEYAAVNYLTTVRDGKDRKLREKLKEQSQTLPCTCGMPHTKTMMLDGMYSEAD
ANSLAGYTRASMAAEDPSDKQEQMVVHLTLDNESTETKKKGIRSFRIIQNTHTIDTYSRM
IFPGAYILFNLIYWCVYC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgccgtataacgccagggtcctgcttcttcttcttctgtctctgattctaatggcagag
tcccggaggctgggaagcaggagaaagcgatggtccgagccgggagagactctcaagcca
ggaaaggccctgggggaaacacctgatgctgtggttcttgttgggaaggcaggcttggag
gctgccatggtgaacggtcctctgtcaaggaagatcattgatggcaccaaaacacggaag
ctgaaaaccagccaccttctgcgtgtggatgagcatgacttcaccatgaggccagcattc
gcaggtccagctgtcccagttggagtggatgttcaggtggagagtttggacagcatatcg
gaagttgacatggacttcaccatgactctgtatctaaggcactactggaaggacgaaagg
ttggcttttccaagcgccacaaataagagcatgacatttgatgggcgcctagtgaaaaaa
atctgggtccctgatgtgttcttcgtccattctaagaggtccttcatccatgacaccacc
accgacaacatcatgctgagggtctttccagatggccatgttctgtacagcctgagggta
acagttactgctgcttgcaatatggatttcagtcgtttccctctggattcacaaacatgc
actctggagctggagagctatgcttacactgatgaagacctgatgctttactggaaaagt
ggggatgagtccctgagcacagatgacaggatctctttatctcagtttctcatccagaag
tttcacaccacctccagactggctttctacagcagcacaggctggtacaaccggctgtac
atcaacttcaccctacggcggcacatctttttcttcctgctgcagacgtactttcctgcc
actctgatggtcatgctgtcctgggtgtccttctggatcgaccgtagggctgttcctgcc
agagtctctttaggtataactacggtgctcactatgtctaccattattactggagtcaac
gcctccatgccaagggtctcttacatcaaagctgtcgacatttacctctgggtcagtttt
gtctttgtattcctctctgtgcttgaatatgcagcggtcaactatctgaccacagtgagg
gatggtaaagaccggaagctaagagaaaaactaaaggaacagtcccaaacgttgccctgc
acctgtggcatgcctcacaccaagaccatgatgctggacggaatgtacagtgaggctgat
gcaaacagtctggcagggtacaccagagcctctatggcagctgaggatccgtccgacaaa
caggagcagatggtggtccatctcacattggacaatgagtccacagagactaagaagaag
ggcattcgcagcttccgcataatccagaacacccacaccattgacacttactcccgcatg
atcttcccaggtgcttacatcctattcaacctgatctactggtgtgtgtactgctga
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