Xiphophorus couchianus (Monterrey platyfish): 114158499
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Entry
114158499 CDS
T05908
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114158499
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114158499
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
114158499
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C2: calpain family
114158499
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Noelin-1
Lipase_GDSL_3
Motif
Other DBs
NCBI-GeneID:
114158499
NCBI-ProteinID:
XP_027895867
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Position
15:8120140..8131764
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AA seq
772 aa
AA seq
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MMEDGNHPEKEPMVEKTKVKVLRDTEASLEADGNVDYGITGANSIYSAILSRNEAVKDAK
RLKTFLELRDKYVTKHILFEDPLFPANDSSLFYSQKPEMKFEWKRPSEICEDPQFIVDGA
NRTDICQGTLGDCWLLAAIACLTLNEKLLYRVIPPEQSFTENYAGIFHFQFWRYGEWIDV
VVDDRIPTCDNQLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVT
EFFELSEAPADLFTIMRKALERGSLMGSSIDVSSANEIETRTDQGLVRGHAYSIIGLEEC
DEVSKDSRIRLIRLRNPWGFVLWKGRWSAKSEEWSTISTADRENLKKQTVETSEFWMSFD
EFKKTFTKLEICNLTPDGLQDDVRMTWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRL
QLYEEDDDPEDGQVVCTVVVALMQKGRRMQRHKGAKFLTVGFSIYKVPEKMQGQNQHLQK
DFFLYTASTAKCKSYINLREVSERFRLPPGEYAIIPTTFEPHEEGEFILRVFSEKQSTSE
EVGSTIQTGQIEQEKKKKKKPIVFVSDRAHANKEIEHDGIQGEKRKKPKQKQLQAEEETE
EEKKFRAIYKQIAGEDMEICANELKTVMKNVLSKHSEIKTEGFSLETCRSMIALMDTDGS
GKLNLQEFKHLWKKIKAWQLIFKQYNQNKSCSISSFEMRNAVNDAGFHLNKQLYDIIAMR
YADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgggaaccatccagagaaggaacctatggttgaaaaaacaaaggtgaaa
gtgcttcgtgacactgaggcgtcactggaggctgatggcaatgttgactacgggatcaca
ggagcaaactccatctactctgccattctcagcagaaacgaggccgtcaaagatgcaaag
cgcctgaagacctttttggagctgagggataaatatgtgacaaagcatattctttttgag
gatcctctcttccctgcaaacgactcctcacttttttacagccagaagcccgaaatgaag
tttgagtggaaacgtccctcagaaatctgtgaagatccccagtttatcgtcgatggagcc
aacagaactgacatctgccaaggaactctgggggactgctggctgctcgccgccattgcc
tgtctgactctgaacgagaagctgctgtacagagtgattcctccagaacagagcttcact
gaaaattacgccggaatcttccactttcagttctggcgttatggcgaatggattgatgtg
gttgtggatgaccgcatccccacctgcgacaaccagctggttttcaccaaatctttcaga
aagaacgaattctggagcgctttgttggaaaaagcttatgccaagttgcatggatcttat
gaggcactgaaagggggaaacacgttggaagccatggaggatttcacaggtggagtcact
gagttttttgagctgtccgaggcacctgctgatctcttcaccatcatgaggaaggcgctg
gagaggggctcgctgatgggcagctccatagatgtttcctccgccaatgaaatagagacc
cggactgaccaagggctggtcaggggtcacgcctactccatcatcggcctggaagagtgt
gacgaagtctcaaaggactccagaatccgcctgattcgtctacgtaatccctggggattt
gtgctttggaagggtcgctggagtgccaagtcagaagagtggtcgactatttctactgca
gacagggagaatctgaaaaaacagacggtggagacaagtgagttctggatgtcctttgat
gagttcaagaagactttcaccaaacttgagatatgtaacctcacccccgacggtctgcag
gatgacgtacggatgacctggacggtttcggtcaatgaaggtcgctgggtgagaggtagt
tctgctggtggctgcaggaacttcccagacacattttggacaaaccctcagtatcggctt
cagctgtatgaggaggacgacgacccagaggacgggcaggtggtctgcactgttgttgta
gccttgatgcaaaagggtcggaggatgcagcgccataaaggagcaaaattccttaccgtt
ggattttctatctacaaggtgccagagaagatgcaaggccagaatcaacatctgcagaag
gacttcttcctctacacagcctccacagctaaatgcaagagttacatcaacctgcgggag
gtgtcggagcgcttccgactgcctccgggagagtatgccatcatccccacgacctttgaa
ccccatgaggagggagagttcatcctcagggtcttctctgagaagcagagcacatctgag
gaagtaggaagcaccattcaaactggtcaaatagagcaagagaagaaaaagaaaaagaag
cctattgtgtttgtatcagacagagctcacgccaacaaagaaattgagcacgacggcatt
cagggggaaaagaggaagaaaccaaagcagaaacagctgcaagctgaggaagagactgag
gaagagaaaaagttcagagccatttacaaacagattgcaggcgaggacatggagatctgt
gcaaacgaactcaagacggtcatgaagaacgttctttctaaacatagtgagataaagaca
gaaggcttcagtcttgagacgtgtcgaagcatgatcgccttaatggatactgatggatcg
ggcaaactgaatctccaggaattcaaacacttgtggaaaaagataaaagcgtggcagctc
atcttcaaacagtacaatcaaaacaagtcctgctccatcagcagctttgagatgaggaac
gctgtcaatgatgcagggtttcacctcaacaaacagttgtacgacataatagccatgcga
tatgcagacgagcacctcaacattgactttgacagctacatctgctgttttgtgagacta
gagggaatgttcagggcctttaatgccttcgataaagacggagatggaataattaaacta
aatgtcctggagtggcttcagctgacgatgtattcctag
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