Xiphophorus couchianus (Monterrey platyfish): 114158512
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Entry
114158512 CDS
T05908
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114158512
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114158512
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
114158512
NCBI-ProteinID:
XP_027895884
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Position
15:3884999..3902499
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AA seq
1279 aa
AA seq
DB search
MFLLDAQKVSARFPSCCCFVSSRTDEEESSSCAESCVSLKSDRSMDPITVFKTGDQPEHK
EIQQQTAAVPSSSCLSMKSDRSMDPITVFKDGHQSVQNSDELQDSTVLSVQSVHHQTDLG
SIFKALEESIIGFVKSELEKLLNVVGPDYHEYLKNQRENEELLDGGEEEQENTSGESFLK
LTLDFLRRMKQKRLADYLHSKTSSTKNQRGHKSNLRKRFQSVFEGIAKGGSPTLLNQIYT
ELYMTEGGTGEVNEEHEVRQIEITSRKQDSPETIRIEDIFKVHNDKAQPIRTMLTKGVAG
IGKTILTQKFTLDWAEDKSNQDIHFTFPFTFRELNVLKEKRFSLVELVHRFFPESKEICD
FEQFSVLFIFDGLDECRLSLDFHNSPILTDVTESTSVDVLLINLIRGKLLPSARLWITTR
PSAVSQIPLQCVDVMTEVRGFSDSKKEEYFRKRFKDKKQANRIVSHIKSSRSLHIMCHIP
IFCWINATVLEDMLKTREEGELPKTLTEMYIHFLVVQTKVKKVKYDKGMETDPHWSPESR
KMIESLGKLALDQLQKGNLIFYESDLTECGIDIRAASLYSGVFTQIFREERGLYQDKVFC
FIHLSVQEFLAALHVHLTFINSGTNLLMAETGELDSVATLLHQLAVDKALQSPNGHWDMF
LRFLLGLSQPVNQILLRGLNTQTQSSSQSNQDTIQYIKKKISDNVSVEKSINLFHCLNEL
NDRSLVEEIQQYLKSGSLSIDKLSPAQWSALVFILLTSKKDLDVFDLKKYSASEEALLML
LPVVKASNKALLSDCTLSEKTCEAISSVLSSQSCCLREVDLSHNDLEDVGMEALSSGMLG
QQCGLESLRVADCNLSQKSCETLNLCLSSNSFRLKSLDLNHNFLQDVGLKQLSDGLKSPY
CKLESISLSACSLSEQSCETLASALSSPSCKLRSLNMSHNNLGDSGVKRLCVELENKHCQ
METVILCGCQLSERCCKYISAVLSTQPSKLRELDLSNNNLTDAGVQQLSSGLGSPHCKLE
TLRLSGCLVTGKGCGYLASALSSNPSPLKELDLSYNHPGVAGKQMLCSEQKGPPWKLANL
SLEQGGEHRLKPDVRKYFCELELDMNSVNRQLQLSDNNTKIRQVDDEQPYPDHPNRFQTC
WQLMCRNGLTGRCYWEVEWKGAVLLSVSCKGIKRSGKSEACRFGRNDQSWTLECSDVFGF
AAWHVNRETTILGSSAAHRVGVYLDHPAGMLSFYDVSSDTLEHLYTFCATFTEPVYPSFG
LWSGASVSLCSAASKKPAA
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgttagatgctcagaaagtttcagccaggtttccttcatgctgctgttttgtt
tcttccaggaccgatgaggaggaatcttcctcctgtgctgaaagctgcgtgtcgctaaag
agtgaccggtccatggatccaataactgtcttcaaaactggagaccagcctgagcataaa
gagatccagcagcagacagcagccgtgccctcatccagctgtttatccatgaagagcgac
cggtccatggatccaatcactgtatttaaagacggacaccagtctgttcagaacagtgat
gagctgcaggactcaacggttctcagtgttcagtctgttcatcaccaaactgatctgggc
tccatttttaaggctctggaggaaagcatcataggttttgtgaagtcagagttagagaaa
ttgctaaacgttgttggaccagattaccatgaatacttaaagaaccagagagagaatgaa
gagttgctggatggaggtgaagaagagcaggaaaataccagcggagagtcatttctgaag
ctcacactcgactttctgaggaggatgaagcaaaagaggctggcggattatctgcatagc
aagacctcttcaacgaagaatcaacgaggacacaagtctaacctgaggaagagattccag
tctgtgtttgaagggatcgctaaaggcggaagcccaactctgctgaaccagatctacacg
gagctttacatgacagagggaggaaccggagaggtcaacgaagagcacgaggtcaggcag
attgaaatcacctccagaaaacaagacagtcctgaaacaatcagaatagaagacattttt
aaggttcataatgacaaagctcagccaatcagaacgatgctcactaaaggagttgctggc
attgggaaaaccatcctaacgcagaagttcactttggattgggccgaagacaaatcaaat
caggatatacattttacttttccgtttaccttcagagagctgaatgtgctgaaagagaaa
agattcagtttggtggaacttgttcaccgcttctttccagaaagcaaagaaatctgtgat
tttgaacaatttagcgttttgttcatttttgatggtctggatgaatgtagactttctctg
gacttccacaacagtccgatcctgaccgacgttacagagtccacctcagtggacgtcctg
ctgataaacctcatccgggggaaactgcttccctccgctcgcctctggataaccacgaga
ccttcagccgtcagtcagatccctcttcagtgtgtggatgtgatgacagaagtcagagga
ttttcagattccaaaaaggaggagtactttaggaagaggtttaaagataagaagcaagcc
aacaggatcgtctcccacatcaaatcttcacgaagcctccacatcatgtgccacatcccg
atcttctgctggatcaatgctacagtcctggaggatatgctgaaaaccagagaagagggg
gagctgccaaagaccctgacagagatgtacatccactttttagttgttcagaccaaagta
aagaaagttaaatatgataaaggaatggaaacagatcctcactggagtccagagagcagg
aagatgattgagtctctgggaaaactggctttagatcagctgcagaaaggaaacctgatc
ttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcactgtactca
ggagtgttcacacagatcttcagggaggagagagggctgtaccaggacaaggtgttctgc
ttcatccatctgagtgttcaggagtttctggctgctcttcatgttcatctgaccttcatc
aactctggaaccaacctgctgatggcagaaacaggagaactagattctgtagcaaccctc
cttcatcagctcgctgttgacaaggccttacagagtccaaacggacactgggacatgttc
cttcgctttctgttaggactttctcagccagtgaatcaaatattgctacgaggcctaaac
acacaaacacaaagcagctcacaaagcaaccaagacacaatccagtacatcaagaagaaa
atcagcgataatgtgtctgtagagaaaagcatcaatttgttccactgtctgaatgagctg
aacgatcgttctctggtagaagagatccaacagtacctgaaatcaggaagtctctccata
gacaaactgtctccggctcagtggtccgctctggtcttcatcttactgacatccaaaaaa
gatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgatgctg
cttcctgtggttaaagcctccaacaaagctctgctaagcgactgcaccctctctgagaaa
acatgtgaagctatatcctcagtccttagttcccaatcttgctgcttgagagaagtggac
ctgagtcataatgacctggaggacgtaggaatggaagcgttgtcttctgggatgttgggt
caacaatgtgggctggaatcactgagggtagctgactgcaacctgtcacagaagagctgt
gagactcttaacttgtgtctcagttcaaatagcttcaggcttaagagtctggatttgaat
cacaacttcctgcaggatgtcggactgaagcaactttctgatggattgaagagtccatac
tgcaaactagaaagtattagtttgtcggcatgtagcctctcagagcagagctgtgaaact
ctggcctcagcgctcagctctccctcctgcaagctcagatctctgaatatgagccacaac
aacctgggagattcgggggtgaagcggctctgtgttgaactggagaacaaacactgtcaa
atggagaccgtcatactttgtggatgccaactctcagaaagatgctgtaaatatatatct
gcagttctcagcactcagccatccaaactgagagagctggacctgagtaacaacaacctg
acagatgcaggagtgcagcagctgtccagtggcctgggcagtccacactgcaagctggaa
actctcagactgtcaggctgtctggtcacaggaaaaggttgcggctatctggcatcagcc
ctgagctccaacccctctcctctgaaagagctggacctgagctacaaccatccgggagtc
gcagggaaacaaatgctgtgttctgagcagaagggtccaccgtggaaactggctaatctg
agtttggagcaaggcggagagcacaggctaaaacctgatgtcagaaaatatttctgtgaa
cttgagctggacatgaattcagtgaacagacaactccagctgtctgacaacaacacaaag
attagacaggtggatgatgagcagccataccccgatcatccaaacagattccagacctgc
tggcagctcatgtgccgaaatggcctgactggtcgctgttactgggaggtggagtggaag
ggagcagttctcctctccgtgagctgcaaaggaatcaaacgaagtggaaaaagtgaggcc
tgcaggtttggaaggaacgatcagtcctggacgttggagtgctctgacgtgtttggtttc
gctgcctggcatgttaacagagaaacaaccatccttggttcctctgccgcccacagagta
ggagtttatctggaccatcctgcaggaatgctctccttctacgatgtctcctccgacaca
ttggagcatctctacaccttctgcgccacatttactgaacccgtttatcccagttttggt
ttgtggtctggagcctcagtgtcactgtgttcagcagcttcaaagaaacctgcagcgtaa
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