Xiphophorus couchianus (Monterrey platyfish): 114158706
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Entry
114158706 CDS
T05908
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114158706 (gtf3c2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
114158706 (gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
114158706
NCBI-ProteinID:
XP_027896271
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All DBs
Position
15:complement(2797186..2818072)
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AA seq
932 aa
AA seq
DB search
MDPDDSGQGLDTPSQQDICLSYSLRGRQRKRNSKYVDFETDDKDIVKRVKQKSSRKSVGK
GATSRKTPTKQRKTKTPEQQTTNGEIESPQTIPADSVDTVITPRKPKRPKKTQSAETASA
AGDLPTGKTGGSVVENSVQQENGSLKPKRKYVRKKPKEEVRDPPDEKEPDPPAEPEEEVQ
SGGRRQRGAAKAALKYLQLLAKEVFSHPRDELGSNLHEDEESEQKSSKQTKGRKRKLDDV
EKDFVPDIEDEEADEEEEYQEVSDAESDFGGREKFLPVFHQQRSQNGKPHNGIDCSIMRT
ILDSAEMTKKFREENYSSWVFPEWVPSSNNWEPVPENELEKYLPQELESAAFKVSRDNLN
QEESPLLRLSRFEAMAAHPCRWDMFLFAGGPVWALEWCPTPDGAPASQYIALACHRGMDD
LHYVNQTYSEPGLVQLWDCGKLEYNKRPDSQPSLVYGLAQDKGFIWQLKWCPAGGWELPD
SVRKAPFLPRLGLLAVATSSGVVTIYSLPHPDALLSNSKLTHSERNNEKPPIYKVRGVIT
LKLGCIKSLREERSGQVLSMDWLPQKPHNIMAVGFYDGVVGLWDLCTKSSLLRVRESDRS
LTLLPYRSILAHDNAVRALVFCPASRYLLTSAGEDRCLKTWDLRRLSNMVKVQKRHLTTE
LCWPLDSPGVLVGQESAFVPRSSVGVHYVDHYLRSYFAIPRSTSVWSLSYSDWLHTVMSS
DTLGDLILSILPLPNCSVKRTSLRRFPAYITSKEPYEAQEGQNKVEEEEGQEAGETEKPI
NDEDEGGRVGGDSGLHRQFQTYKQAVKKYYLHFKDLDMRRLTGLNKHALWKHMRSTEVTA
VMNLDDMPLAALYKARFNPNMSSHVWVGSAGQTGLVRLHCARTFITPQVKTMISNHQAQF
SVLYSVQNHSGGVQTAAEQREQHSLPHCTATR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgatgactctggacaagggctggatacgccatcacagcaggatatttgtttg
tcttatagcttaagaggacgacaacgaaagagaaattctaaatatgttgattttgaaacc
gatgacaaggatattgttaaaagggtcaaacagaaatcctctcgaaagtcagtggggaaa
ggagcaacctctcgaaagactcccacaaagcagagaaaaactaaaacacctgaacaacag
accacaaatggagaaatagaatcaccacaaacaattcctgcagactctgttgatacagta
ataactcctagaaaaccaaaaagacccaagaaaacacaatctgcagaaactgcctctgct
gctggggacctgccgactggaaaaactggaggcagtgttgtagaaaattctgttcagcag
gaaaatgggtcactgaagccgaaaagaaagtatgtcagaaagaagcctaaagaggaagtt
agagacccaccggatgaaaaggaaccagatcctcctgctgaacctgaagaggaggtccag
tcagggggccgtcgccagagaggagctgctaaagcggcactgaagtacctccagctttta
gccaaagaggttttctctcatcccagagatgaactcggctccaacctgcacgaagacgaa
gaatccgaacagaaatcttccaaacagacaaaaggtcgaaagagaaaacttgatgacgtt
gagaaagactttgtgccagatatagaagatgaagaagccgacgaggaagaggaatatcaa
gaagtgtcagatgctgaatcagattttgggggacgagagaaatttcttccagtttttcac
caacagaggagccaaaatggcaaacctcacaacggaatcgactgtagtatcatgagaaca
attctggattctgctgagatgacaaagaaattccgggaagagaactacagcagctgggtg
tttccagaatgggttccttcctctaacaactgggagcctgtaccagaaaatgaattagaa
aaataccttcctcaagaactggagtcagctgccttcaaagtgtccagagacaatctaaac
caggaagagtctcctctgctaagactcagcaggtttgaggcgatggcagctcacccgtgc
cgctgggacatgtttctgtttgctggtggacccgtctgggccctggagtggtgtcccacc
ccggacggcgctccggcctcccagtacatcgctctggcttgccatcgagggatggacgac
ctgcactatgtgaaccagacctactcagaacccggactggtccagctgtgggactgtggc
aaactggagtacaacaagagaccagactctcagccctccctggtttacggtttggctcag
gacaaaggcttcatctggcagttaaagtggtgtccagcaggaggctgggagcttcctgac
tctgtcagaaaggctcctttcttgcccaggctgggtttgctggctgtagccacgtccagc
ggtgtggtcaccatctacagcctgcctcatcctgatgctctgctctcaaactcaaaactc
acacactctgaaagaaacaatgaaaaacctccaatttacaaggtacgaggtgtgataacg
ttaaaacttggctgcatcaaatctcttcgtgaagaaaggagcggacaggttctgtctatg
gattggcttcctcaaaaaccacataacataatggctgttggattctacgacggtgttgtt
ggactctgggatctttgtacaaaatcttccctgttgcgagtcagagagtcagaccgatct
ttgactctgctgccctatcgatcgatactcgctcacgacaacgccgtcagagctctggtc
ttctgtcctgcatccagatacttgttgacatcagcgggtgaggaccgctgcttgaagacg
tgggatctgaggaggctcagtaacatggtcaaggtccaaaaacgccacctgaccactgag
ctctgctggccgctggactcacctggggttctggttggccaggaatctgccttcgtaccg
agaagttcagttggagttcattacgttgatcactacctgcgctcctactttgcgattcct
cggagtacatctgtatggtccttgtcttactctgattggctgcacaccgtgatgtcatca
gatacactcggcgatctgattctctccatcttaccgctgcccaactgctctgtcaagaga
acatccttgagacgttttcctgcctacatcacatctaaggagccttatgaagcacaagaa
ggacaaaataaagttgaggaagaggaaggacaagaagcaggagagacagaaaaaccaata
aacgatgaagacgagggaggaagagttggaggagattctggtcttcaccggcagtttcag
acgtacaaacaggctgttaagaaatactacctgcactttaaagacttggatatgcgacgc
cttacaggactcaataagcacgctttgtggaaacacatgcggagcacagaagtaacagca
gttatgaacctggatgacatgccgctggctgcactctacaaggcccggttcaacccgaac
atgagcagccatgtgtgggttggttctgcgggtcagacgggcctggtgaggctccactgt
gcgaggactttcatcaccccacaagtcaagactatgatcagtaatcatcaggcccagttc
agcgttctgtactcggtccagaaccacagcggcggcgtccagacggcagcggagcagcga
gagcaacacagtttacctcactgcactgccacaaggtga
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