Xiphophorus couchianus (Monterrey platyfish): 114158709
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Entry
114158709 CDS
T05908
Symbol
ino80
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114158709 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114158709 (ino80)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
114158709 (ino80)
INO80 complex (yeast)
114158709 (ino80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
114158709
NCBI-ProteinID:
XP_027896277
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Position
15:14843941..14887618
Genome browser
AA seq
1592 aa
AA seq
DB search
MPFLNQKCVHFFSKGFCPAGQRSQCCMASGQDGRQEDGSPGLSGLAKPLYLQRLERSLKL
DSFLRQTAAIFNRDISDDSDDSDGALGSGLSLDASNQHAALSVKSEPCEQEDALSDCKPL
NGVLQGKADQKADKTNLYNFSKLKKNRKWLKNILLSDDTTDSDAESDDANFSLSREELHD
MLRLHRHNRQHQSKFYSDRELYQYQYYSTGLLSSHDPFYEQQRHLGTKKKKIKDEKKIKG
KLKKVKKKKKRGEEFLDEERPYITKVFAKFSHDAPLPMVKKKHLTVEQLNARRRKVWLTI
AKKEVPKSFKQKTSAKNVVLTNAKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMM
LYWKKYDKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSGKAS
MGAPEGDTTQEDILRKLEDNSSQRQIDVGGGVMVNVGQEDYDSEYYKSQALRNAREAYQI
HQERTRMFDEEAKDSRSASLHVAGSMSSGLASGFGESYSLSNPSIQAGEDIPQPTIFNGK
LKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERDNIWGPFLIISPAS
TLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQD
VKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF
IMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSD
KIEILTYCQLTSRQRLLYQALRNKISIEDLLQSSMGTAQQASSTTSSLMNLVMQFRKVCN
HPDLFERQETRSPFHMSVKPYVISKFLYRHGLVHTHNQAKNKLLQVLLSPFSPNHIQQSL
FHRKDDEKGSCFSFLRFIDVSPAEMSNMMLQGTLVRWLGLFLSMKAAYRLYYQRLFDPMG
EHQDEGDRGRIQHKSVCLSHKDLILWLNKPTAFPNTQTSLVLQDLVFTASRPGILAHTDV
RIHDRNSATSTLRPCEATLPPKFLLAATPKVTAVPMERYCADRSAEYEWRMMRGGGGTVY
KQCFLYGSPELASDWRMRANAIHPQCPGGLMALQPRHGWSFIRIPDKESLITESGKLHTL
DILLNQLKAQGHRVLIYSQMTRMIDLLEEYMVYRKHTYIRLDGSSKISERRDMVADFQSR
TDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLIC
QGTIEERILQRAKEKSEIQRVVISGGNFKPDTLKPKEVVSLLLDDDELEKKLRQRQEEKR
QQEESSKVKERKRKREKYAEKQKKNEESENKRKKEMNLVISHAPSADNSNLSADGDDSFI
SVEMDSAMPSPFSEISLSSELQPGSLPPDADADESSSDMLVIVDDPVSSAPQSRATNSPA
SVTGSVSDNMNGVSASDSISPGRGRSGRSRGRPKGSGGAAKSGGKGRGRKSTAGSAAAMA
GAKAGAAAASAAAYAAYGYSVSKAGLSAAGPLQPSLARLATGPAFKLSRSSSPLAKGAPS
GHSSHSQLSHGHHHSSHGASRKGKGPGGPGTR
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgccatttcttaaccaaaagtgtgtgcatttcttcagtaaagggttctgccctgctggg
cagaggagtcagtgctgcatggcgtcagggcaagatgggcgccaggaggatgggtcgccg
gggctctctggcctggccaagcctctctatctgcagcgcttggaaagatctctgaagttg
gacagttttctgcgacaaaccgctgctatctttaacagagacataagcgacgatagcgac
gacagcgatggcgctttggggtcgggcctttccctggacgcctccaaccaacacgcagca
ttgtccgtgaagagtgagccatgcgagcaagaagatgcgctatcagactgcaaacccctt
aacggagtactacaaggtaaagcagaccaaaaggccgataaaacgaatctctacaatttt
tcaaagttgaaaaagaacagaaaatggctcaagaacatcctcctgagtgacgacacaaca
gactctgacgcagagtccgacgacgctaacttcagtttgtctcgggaggagcttcacgac
atgcttcggttacaccgtcacaatcggcagcatcagagcaagttctactccgaccgagag
ctctatcagtatcagtactacagcacaggactcctgtcaagtcatgatcctttctatgag
cagcagcgccacctgggcacgaagaaaaagaaaattaaagatgagaagaaaatcaaagga
aaattaaagaaagtgaagaagaaaaagaaaagaggtgaagaatttctcgacgaggagcgt
ccatatatcaccaaggtgtttgcaaagttttcccacgatgctccactgcccatggtgaag
aaaaaacatctcactgttgaacagctgaatgcacggcggcgtaaagtgtggctcaccatc
gctaaaaaggaggttcctaagtctttcaagcagaagacttctgccaaaaacgtagtactc
accaacgctaaaaagctggcccaccagtgcatgcgagaggtccggcgtgccgccatccag
gctcagaagaactgcaaagagacgctgccccgtgcgcgacgcctcaccaaggagatgatg
ctctactggaagaaatatgacaaagtggaaaaagagcacaggaagagagctgagaaggaa
gctctggagcagcggaaactcgacgaagagatgagagaggctaaacgtcagcagcgtaag
ctgaactttttgatcactcagacggagctgtacgctcattttatgagcggcaaagccagc
atgggggcaccggaaggggacacgacgcaggaggacattttgcgaaagcttgaagacaat
tcgtcccagagacaaattgatgtgggaggaggcgtgatggtcaatgttggacaggaggat
tatgacagtgaatactacaaatcgcaggctttgaggaatgctagagaagcttatcagatt
caccaagagagaacaaggatgtttgacgaagaggccaaagacagccgcagtgcctctctg
catgttgcgggcagcatgtcctcaggactggcctctgggtttggagagagctacagtttg
tcaaacccctccatccaagcaggcgaggacattcctcagcccaccattttcaacggaaaa
cttaagggatatcaactcaaaggcatgaactggctggccaacctctatgaacaggggata
aatggaatcttggcagatgaaatgggacttgggaagacggttcaaagtatcgccctgctg
gcccacctagcagagagagacaacatctggggtccgttcctgatcatctctccagcgtcc
acgctcaacaactggcaccaggagttcagccgctttgtgcccaaattcaaggtgctgccg
tactgggggaacccccacgaccgcaaagttattcggaaattttggagtcagaaaacactt
tatacacaaaacgcaccttttcacgtggtgatcacgagctaccagctggtagtccaagat
gtaaagtacttccagagggtcaagtggcagtacatggttctggacgaggcccaggctctg
aaaagcagctccagcgttcggtggaaaatcctcttgcagttccagtgtcggaacagactc
ctgttgaccgggacgcccatccagaacactatggctgagctgtgggccctgctgcacttc
atcatgcccacattgttcgattcccacgaagagtttaacgaatggttctccaaggacatc
gagagccacgctgagaacaagtctgccatcgacgagaatcagctttccagattgcacatg
atcctcaagccattcatgctgcgcaggatcaagaaggacgtggaaaatgaactctcagac
aagattgagatcctgacctactgccagctgacgtcccgtcagaggctgctctaccaggct
ctgaggaacaagatctccatcgaggacctcctccagtcttccatgggcacggcccagcag
gccagcagcaccacttcctcgcttatgaacctggtcatgcagtttaggaaggtttgcaac
caccctgacctgtttgagcgtcaggaaacccgctcccctttccacatgtctgtcaagcca
tacgtcatttccaagtttctctaccgtcatggtctcgtccacacacacaaccaggccaag
aacaaattactacaagtgctgttatctcctttctcgccaaatcacatccagcagtccctt
tttcataggaaagatgacgaaaaaggaagctgcttctccttcttgcgctttattgatgtg
tcaccagcagaaatgtccaatatgatgctgcaaggcaccttagtgaggtggttaggtctt
ttcctgtcaatgaaagctgcttaccggctctactatcaacggctgttcgaccccatgggg
gaacatcaagacgaaggcgacagagggaggatacagcacaagagtgtgtgtctttctcac
aaggatctgatcctgtggctcaacaaaccgaccgccttccccaacacacaaaccagtctc
gtcctccaggatctggtgtttacagcctctagacccggcattttggcccacacagacgtg
aggatccacgacagaaactctgccacctccacgctccgaccctgtgaagccacgctgcca
cccaagttcctgctggccgccacccccaaggtgacggcagttcccatggagcggtattgt
gccgaccggagtgccgagtacgagtggcggatgatgcgcggcggtggggggacggtctac
aagcagtgctttctgtacggctcccctgaactcgcctcagattggcgcatgagggctaac
gccatccacccacaatgccccggggggctgatggccctccaacctcgccatggatggtcc
ttcatacggatacctgataaagaaagcctgattacagaaagtggcaaactccacactttg
gacatccttttaaaccaactaaaggcccagggccacagagtcctcatctactctcagatg
acccgcatgatagacctgctggaggagtatatggtttatcgaaaacacacctacattcgc
cttgacgggtcctccaagatttccgaacgcagagacatggtggccgacttccagagccgt
acggacatctttgtgttcctgctcagtacgagggctggaggacttggcatcaacctgacc
gctgcggacacggtgatcttctacgacagcgactggaaccccacggtggaccagcaggcc
atggaccgggctcaccgcctgggtcagaccaagcaggtgaccgtctaccgcctcatctgt
cagggcaccatcgaagagaggatcctgcaacgcgccaaggagaagagcgagatccaaagg
gtggtcatctccggaggcaacttcaaaccggacacgctgaagcccaaagaggtggtcagt
ctgcttctggacgacgacgagctggagaagaaactgcgtcaaagacaggaggaaaagagg
cagcaggaggagagcagcaaggtgaaggagaggaagaggaagagggagaagtacgcagag
aagcagaagaagaacgaggagtcggagaacaagaggaagaaggagatgaacctggtgatc
tcccacgcgccctcggccgataactccaacctgtccgcagacggggacgactcgttcatc
agcgtggagatggactcggccatgcccagtccgttcagcgagatctctctgagcagcgag
ctgcagcccggctctctgccgccggacgccgacgccgacgaaagcagcagcgacatgctg
gtcatcgtggacgatcccgtctcgtcggcgccgcagtctcgcgccaccaactcccccgcc
tccgtgaccggatcggtttctgacaacatgaacggtgtttcagcctccgactcgatcagc
ccaggcagaggccggtccggtcggagtcgcgggcggcccaaaggatccggaggagccgcc
aagtccggagggaagggccgaggccggaagtcaacagctgggagtgcggcggccatggcg
ggggcgaaggctggggcggcagctgcctcagcagcagcttatgctgcttacggatacagt
gtttccaaagccggcctctccgctgccggccccctgcagccctccctggcgcgactggcc
acaggccccgccttcaaactcagcagaagctcctcccccctcgccaaaggagcgccctcc
ggccacagctcccactcgcagctgtcccacggccaccaccacagcagccacggcgcatcc
aggaagggcaagggccccggcggccccgggactcgatga
DBGET
integrated database retrieval system
