Xiphophorus couchianus (Monterrey platyfish): 114158731
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Entry
114158731 CDS
T05908
Symbol
afdn
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04517
IgSF CAM signaling
xco04520
Adherens junction
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114158731 (afdn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114158731 (afdn)
04530 Tight junction
114158731 (afdn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
Yop-YscD_cpl
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
114158731
NCBI-ProteinID:
XP_027896316
LinkDB
All DBs
Position
15:2262421..2372915
Genome browser
AA seq
1883 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDVLPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKEKKKREKEFARIPDG
DEQILSREDGENNRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PESGGTLKIYADSLKPNIPYKTILMSTRDTADFAVVEALEKYGLEKENPREYCIARQEEK
TGKEVILDDLDCPLQILRDWPADRGAMVFQLKKRPPDYQPRKGRKDDKGLRGKDGSMPPE
KLPYLVELSPGRGNHYAYYAYRHQEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQLLG
PGILPHHCNLMHSEGMVTVTPHGHDADTFVDGQHITETTVLRSGSTLQFGSAHVFKFVDP
MVDQGGKRDPNAAMRSRHKSGSVPETTFDLRGDVLSGAPLPTSKSSGKLEMERGMVKPMI
RGEQQDSRSQDLSADRTELTLPASIDFRENSEDTFLSAIINYTNSSTVHFKLSPTYVLYM
ACRYVLSPTYRPDMSPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQKNIAGALAFWMA
NASELLNFVKQDRDLSRVTLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHN
PQRPKIEDVLQTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDADSGLCCH
YWGAILRQQLSHIESWAEKQGLELAADCHLSRIVQATTLLTMDKYSTQDVQNIHNTCFKL
NSLQLHALMTNYRCAQDEPYIPPDLIDHVVAVAENTADELARSDGREVQLEEDPDLQLPF
LLPEDGYSCDVVRHLPNGLQDFLEPLLQRGFCRLTPHPRSPGTWTIHFEGADNDNHFSAA
DNTEMPMRKEPEVVTVTLKKTNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADKDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRAS
DRGRDKNGKMRPKSEGFELYNNAVQNGDPESPQPGWDSYAEPKKMSGEDRLLKNRADHRS
SPNVANQGQSPATKSAYPGGPGTKITSVSTGNLCADDEPSPPRPEAYPIPTQTYPREYFT
IPASKSQDRVVGPGQGPPQHWQGMEDREHLPVVDNIHNSMQRINHSQEDLYPPVGMMRPD
ERMQPLYPQDYQHRDLDYQHRDLDYQHRGPPGGVGAPLDHWTPQPQVSSSLESSTSSQEQ
LNFSASSTSSNKGQNQKTGPGRWKTPNTPHIVPPHSVQPPSRSDLPPPPPPPPAVYPDPY
DPQPELPPPPPATISPVTAQQAADRRKREEQQRWYEKEKARLEEERERKRREQERKLGQI
RANPVMPVQPHNNGGAMPPPHHQPPMASMAPPQPYHAPQPQPPPPPSRPEKLSSLPRSAV
LPPAAATSAAMDTVIRELLPQQQPRTIERRDLQYITISKEELSTSDSLSPDPWKRDAREK
AEKQQQLHIVDLLDKEIQELQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEDEEEE
DDEDMDAMLIMQRLEAEKRARQQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERVKQ
EEERRWREEERVKREAEEKRRQEEEYYTRLEAERRRQHEEAERKLLTPDEPAGLYRPPLP
RDYNPPAPHNPTNTPPPPPQRNTSYLKTQVISPDTLYTAKFVSYAGDDEDEEEAYSAGSG
GQSGFNSHTGNSTGVVGSGEFYNDPRDKWTKSQEQENSIPSDAPESLTFKERQRLFSQGK
EVSNKVKASRKLMELENELNTKQ
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccagcccacggaggacctggagttccatggc
gtgatgcggttctacttccaggaccgggtggccgggaactttgccacaaagtgcatccgg
gtctccagcacggcgacgacgcaggacgtcatcgagacgttggcggagaagttcaggccg
gacatgaggatgctgtcgtcgcccaagtactcgctgtacgaggtccacgtcagcggcgaa
gagcgccagctggacctggacgagaagccgctggtggttcagctcaactggaacaaagat
gacagggagggacgcttcgtcctgaagaacgagaacgacgtcctgcccaagaagagtcag
agtaacggaccggagaaggagaaagacggagtgatacagaacttcaaaaggactttgtcc
aagaaggagaagaaggagaagaagaagagggagaaagagtttgctcggatcccagacgga
gatgaacagattctgagccgcgaggacggggagaataaccgtctggcggcggaggtttat
aaggacatgccagaaaccagcttcaccaggacgatctccaacccggaggtggtgatgaag
aggaggcggcagcagaaactggagaaacggatgcaggagttcatgagcagcgatggaagg
ccagagtcggggggaactttgaagatttacgctgacagcctgaagcccaacatcccctac
aagaccatcctgatgtccaccagagacacggccgacttcgctgtggtggaggcgctggag
aagtacgggctggagaaggagaaccccagggagtactgcatagcccggcaggaagaaaag
acgggtaaagaggtgatcctggatgatctggactgtcctctgcagatcctcagggactgg
cctgcagacagaggagcgatggtgttccagctgaagaagagacctccggattaccagccc
aggaaggggaggaaggacgacaaggggctaagagggaaagatggctccatgccgccggag
aaactgccttatctggtggagctgagtccaggccgagggaatcactatgcctactacgcc
tatcggcaccaagaagacggctccgactccagagacaaaccgaagctgtatcggcttcag
cacagcatcaccgaggtcggttcggattgcaccgaggacggggccatccagctgctcggc
cctgggatcctgccccaccactgcaacctgatgcacagcgaaggcatggtgacggtgacg
ccgcacggccacgacgccgacaccttcgtggacggccagcacatcacggagaccacggtg
ctgcgatccggatccacactgcagtttggctctgcgcacgtcttcaagttcgtggatccc
atggtcgaccagggagggaagagggacccgaacgccgccatgaggagccgacacaaatcc
gggagcgtaccagagacaacctttgacctccgcggagacgtcctcagtggagcgcccctg
cccaccagcaagagctcagggaaactggagatggagagaggcatggtgaaacccatgatc
cgaggagagcagcaggacagcagatcccaggatctttctgcagacaggacggagctgact
cttccagctagcatcgacttcagagaaaactcggaggacaccttcctgtcggccatcatc
aactacaccaacagctccacggtccacttcaagctgtcgcccacctatgtcctgtacatg
gcctgccgctacgtcctgtcgcccacgtaccggcccgacatgtccccgtcggagaggacg
cataaagtcatcgccatcgtcaacaagatggtgagcatgatggaaggcgtcatccaggag
attgctgaaggggatcagaaacaaaagaacatcgcgggagcgctggctttctggatggcc
aacgcctccgagctgctgaacttcgtcaagcaggaccgggacctgagccgcgtcacgctg
gatgcgcaggacatcctggcccacctcgtccagatggccttcaagtacctggtccactgc
ctgcaggcggatctgaataactacatgcccgccttcctggacgacccagaggaacataat
ccacagagacccaaaatcgaggacgtcctgcagacgctgacgggcgccatgtcgctgctg
cgccgctgccgggtcaacgccgctctcaccatccagctcttctcacagctcttccacttc
atcaacatgtggctgttcaacaaactggtgacggacgccgactcaggactgtgctgccac
tactggggcgccatcctgcggcagcagctgagccacatcgagtcctgggccgagaagcag
ggcctggagctggctgccgactgccacctcagccgcattgtccaggccaccaccctgctg
accatggacaaatactccacgcaggacgtccagaacatccacaacacctgcttcaagctg
aactcgctccagctgcacgccctcatgaccaactaccgctgcgcccaggacgagccctac
atcccgcccgacctgatagaccacgtggtggcggtagcggagaacacggcggacgagctg
gcgaggagcgacggccgagaggtgcagctggaagaggacccggacctgcagctgcccttc
ctgctgccggaggacggctactcctgcgacgtggtgcggcaccttcccaacgggctgcag
gacttcctggagccgctgctgcagaggggtttctgcagactaactcctcatcctcgctct
cctggtacctggaccatccactttgaaggagccgacaacgacaaccacttttctgctgcc
gacaacactgaaatgccaatgaggaaagagccggaggttgtcacggtaaccctgaagaag
accaacggcatgggcctcagcatcgtggccgccaagggtgccggacaggagaaactcggc
atttacatcaagtctgttgtgaaaggcggagcggcggacaaggacggccgtttggcagca
ggtgaccagttgctgagcgttgatggacgcagtctggtcggtctgtcgcaggagagagct
gcagagctgatgacgcggacgggctctgtggtgactctggaggtggccaagcagggagcc
atctaccacggcctggcgacgctcctcaaccagcccagccccatgatgcagagagcgtcg
gaccgcggccgcgataagaacgggaagatgcgtccgaagagcgagggcttcgagctctac
aacaacgccgtgcagaacggcgacccggagagtccacagcccggttgggactcgtacgca
gaaccaaagaagatgagtggagaggaccggcttctgaagaaccgggccgaccaccgatcg
agccccaacgtagccaatcagggccagagtcctgcgaccaagtcggcttatcctggagga
ccgggaaccaagatcacctccgtttccaccgggaacctctgtgcagacgacgagccgtcc
ccgccccggccggaggcctaccccatccccacccagacctaccctagggagtattttacc
atcccggcctccaagagccaggaccgggtggtgggtccggggcaggggcccccgcagcac
tggcagggcatggaggacagagagcacctccctgtggtcgacaacatccacaacagcatg
cagaggattaatcactcccaggaagatctgtaccctccggtgggaatgatgaggcctgat
gagcggatgcagccgctctacccacaggactaccagcaccgggatttggactaccagcac
cgggatttggactaccagcaccgaggtccgccaggaggtgtgggagctccgctggaccac
tggacgcctcagccgcaggtttcctcttcgctggagtcctcgacatccagccaggagcag
ctcaacttctctgcttcctccacgtcttcaaacaagggccagaaccagaagaccgggccg
ggccggtggaagacgccgaacacgcctcacatcgttccgccgcactcggtgcagccgccg
tcccgctccgacctgccgcctcctccgccgccaccgcctgccgtctaccccgacccctac
gatccgcaaccggagctgccgccgcccccgcccgccaccatcagcccggtgacggcccag
caagccgccgaccgcaggaaacgggaggagcagcagcgctggtatgagaaggagaaagcc
cggctggaggaggaaagagagaggaagaggagggagcaagagaggaagctgggtcagatc
cgggccaacccagtcatgcccgtccagccccataacaacggtggagccatgcctcctcct
catcaccagccgcccatggcctccatggcgccgccccagccttaccacgccccgcagccg
cagccgccaccgccaccttccagaccggagaagctgtccagcctgccgcgctccgccgtg
ctgccgcccgccgccgccacctctgccgccatggacacggtgatcagggagctgcttcca
cagcagcagccgcggaccatcgagcggcgcgacctgcagtacatcaccatcagcaaggag
gagctgtccaccagcgacagcctgtctccggatccctggaagagagacgcccgcgagaag
gccgagaagcagcagcagctccacattgtggatctgctggacaaagaaatccaggagctt
caggcgaaaccagagcgaacagcggaggaaagcgaccgactccggaagctgatgctggag
tggcagttccagaagcgactgcaagagtccaaacagagcgacgaagacgaggaggaggag
gacgatgaggacatggacgccatgctgatcatgcagaggctggaggccgagaagagagcc
aggcagcagactgctgtcccagctatctctgttctagacttgttgcaggacgaggagcgg
cggcgcaagcagcagctggaggagattcggaagagggaggcggaggagcgggtgaagcag
gaggaagagaggaggtggagggaggaggagagagtcaagagagaggcggaggaaaagagg
agacaggaggaggagtactacacacgtctggaggccgagcggcggcggcagcacgaggaa
gcagagagaaagctgctgacgcccgatgagccggccggtctgtatcggcccccgctgcct
cgggattacaaccctcccgccccccacaaccctactaacacccccccgcccccaccacag
agaaacacttcctacctcaaaacacaggtcatctcgcccgacacgctctacacagccaaa
ttcgtctcgtacgcgggcgacgacgaagatgaggaggaagcctactcggcagggagcggc
ggccaatcagggtttaactcgcacactggaaactcgacaggagttgtaggatcaggagag
ttctacaacgacccgcgagacaaatggacaaagagtcaggagcaggagaattcgatcccc
agcgacgctccggagagtttgacctttaaggagcgccagcgcctcttctctcaggggaaa
gaggtttccaacaaggtcaaagcttcccggaaactgatggaactggagaacgagctcaac
accaagcagtag
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