Xiphophorus couchianus (Monterrey platyfish): 114158783
Help
Entry
114158783 CDS
T05908
Symbol
rho
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114158783 (rho)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xco04030
]
114158783 (rho)
G protein-coupled receptors [BR:
xco04030
]
Rhodopsin family
Vision
Opsin
114158783 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
114158783
NCBI-ProteinID:
XP_027896480
LinkDB
All DBs
Position
1:complement(20295810..20303215)
Genome browser
AA seq
353 aa
AA seq
DB search
MNGTEGPNFYVPMSNRTGLVLSPFEHPQYYLAEPWKYSLLAAYMLFLIITAFPINFLTLH
VTIKHKKLRTPLNYVLLNLAVADLFMIVGGFTVTLYTALHGYFSLGVTGCNVEGFFATLG
GEIALWSLVVLAVERYIVICKPMTNFRFEEKHAIAGLAFSWVMALTCAAPPLFGWSRYIP
EGMQCSCGIDYYTPKPEINNTSFVIYMFVLHFCIPLFIIFFCYSRLLCTVRAAAAQQQES
ETTQRAEKEVTRMVIVMVISFLVCWVPYATVAWYIFANHGVEFGPVFMTAPAFFAKSAAL
YNPVIYILLNRQFRNCMITTVCCGKNPFGDDEATAAVSKTQTSSVSSSQVAPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcacagaaggacccaacttttacgtccccatgtctaataggacagggttggtg
ctcagcccatttgagcaccctcagtactacctggccgagccgtggaagtactctcttctg
gccgcatacatgctgttcctcatcatcacggccttccccattaacttcctcacccttcac
gtcaccatcaagcacaaaaagctgcgaaccccactgaactatgttctgctcaacctggct
gtggccgaccttttcatgatagttggaggattcacggtgaccctgtacacggctctgcac
ggatacttcagcctgggtgtcaccggctgcaacgttgaggggttctttgccactttagga
ggggagattgccctctggtctctggtcgttttggctgttgagcgctacattgtgatctgt
aagcctatgaccaacttccgcttcgaggaaaaacacgccatcgccggcttggcgttctcc
tgggtcatggccctgacctgtgctgcgccgcctctgttcggatggtcccggtacatccca
gagggcatgcagtgttcctgtgggattgactactacactcccaagccggagatcaacaac
acctcatttgtcatctatatgttcgtcctccacttctgcattcctctcttcatcattttc
ttttgctacagtcgcctgctctgtaccgtgcgagcggctgcagctcagcagcaggagtct
gaaaccacccaaagagcagagaaggaagtgacacgtatggtcatagtgatggtgatctcc
ttcctggtgtgctgggtgccctacgccactgtggcctggtacatctttgccaatcacgga
gttgagttcggaccagtgttcatgacggctccagccttcttcgccaagagcgctgctctc
tacaatccagtcatctacattctgctgaacagacagttcagaaactgcatgatcaccaca
gtgtgctgtggaaagaacccattcggagatgatgaggccactgccgcagtctccaaaacc
cagacttcatccgtctcctccagccaggtggcccctgcttga
DBGET
integrated database retrieval system
