Xiphophorus couchianus (Monterrey platyfish): 114158784
Help
Entry
114158784 CDS
T05908
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
114158784 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114158784 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114158784 (esr1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
114158784 (esr1)
Nuclear receptors [BR:
xco03310
]
3. Estrogen like
3A. Estrogen receptor
114158784 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
DUF7234
Motif
Other DBs
NCBI-GeneID:
114158784
NCBI-ProteinID:
XP_027896445
LinkDB
All DBs
Position
15:complement(9855584..9871152)
Genome browser
AA seq
627 aa
AA seq
DB search
MYKRQNPVQSKQEFGPALRPRISPASSELETLSSTRLPPSPRAPLSDMYPEESRGSGGVA
AVDFLEGTYDYATPTPAPTPLYSHSTTGYFSAPLDAQGPPSDGSLHSLGSGPTSPLVFVP
TSPRLSPFMHAPSHHYLETASTPAYRSSHQPASREDQCDTRDEACSVGELGAGVGVGVGV
GVGAGATAGGFEMPKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATN
QCTIDRNRRKSCQACRLRKCYEVGMMKGGVRKDRGRVLQRDKRQTGVSDREKTGKGLEHK
AAPHHDKRRRSSALGGARSSVTSLPSDQVLLLLQGAEPPILCSRQKMSRPYTEVTMMTLL
TSMADKELVHMIAWAKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQ
DLILDRNEGDCVEGMAEIFDMLLATSSRFRMLKLKPEEFVCLKAIILLNSGAFSFCTGTM
EPLHDSAAVQNVLDTITDALIHHISQSGYSAQQQARRQAQLLLLLSHIRHMSNKGMEHLY
SMKCKNKVPLYDLLLEMLDAHRHHPVKPSQPSSPDDKAPPSTSGVCLGGSSPAGSGPRDG
SETLIRTPSAPSVLQYGGSRSDCTQVL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaggcagaacccggtgcagagcaagcaggagttcggaccagcactcagaccc
aggataagcccagcctcctcagagctggagaccctctcctcgacacgtctcccaccctca
ccccgtgcccccctcagtgacatgtaccctgaagagagccggggctccggaggggtagct
gctgttgacttcctggaagggacgtacgactatgctacccccacccctgccccaacacct
ctttacagtcactctaccactggctacttctctgctcctctggacgcccagggaccaccg
tctgatggcagccttcactctctggggagtgggccgaccagtcctcttgtgtttgtgccc
accagtccgaggctcagcccctttatgcatgctccaagccaccactatctggaaactgct
tcaacaccagcttatagatccagtcaccagccggcctccagagaggaccagtgtgacacc
cgtgacgaggcatgcagtgtgggagagctgggagctggagtcggagttggagttggagtc
ggagtcggagccggcgccacagccggggggtttgagatgcctaaagagacgcgtttctgt
gctgtgtgcagcgactatgcctccgggtaccactatggggtgtggtcctgtgagggctgc
aaggccttcttcaagaggagcattcagggtcacaatgactatatgtgcccagcgaccaat
cagtgtactatcgacaggaataggaggaagagctgccaggcttgccgactcaggaagtgt
tacgaagtgggtatgatgaaaggaggtgtgcgaaaagaccgtggtcgcgttctgcagcgc
gacaaacgacagacgggcgtcagtgacagagaaaaaactggaaaaggtctggagcacaaa
gctgcaccccatcatgataaaaggagacgcagcagtgccctgggaggagcgagatcctca
gtgaccagcctgccatctgaccaggttctgcttctccttcagggcgctgagcccccgatt
ctgtgctcccgtcagaagatgagccgaccctatactgaggtcaccatgatgaccctgctg
accagtatggccgacaaggagctagtccacatgatcgcttgggcaaagaagctcccaggt
ttcctgcagctctccctccacgatcaggttctactgctggaaagttcatggctggaggtg
ctgatgatcggactcatttggaggtcaatccactgccctggaaaactcatctttgcacaa
gacctaatactggacaggaatgaaggagactgtgttgaaggcatggcggagatcttcgac
atgctgctggccacctcttcccgcttccgcatgctcaaactcaaaccggaggaatttgtt
tgcctcaaagcgatcatcctgctcaactctggtgcgttttctttctgcactggaacaatg
gagcccctccacgacagcgcggccgtccagaatgtcctggacaccatcacggatgcactc
atacatcacatcagccaatcaggatactcggctcagcagcaggcgagacggcaggcccag
ctgctcctgctgctctcccacatcagacacatgagcaacaaaggcatggagcacctctac
agcatgaaatgcaagaacaaagtgcctctgtacgatctgctgctggagatgctcgatgcc
caccgccaccacccggtcaaaccgtctcagccttcatctccagatgacaaagctcctccc
tccaccagtggtgtgtgtttgggcggctcctctccagccggttccggacctcgagatggc
agcgagaccctaatcagaaccccctcggctcccagcgtcctgcagtacggaggctcccgc
tccgactgcacccaggtcctgtga
DBGET
integrated database retrieval system
